RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	MAPKAPK3	Q16644	382 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	PGS1	Q32NB8	556 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	MINDY4	Q4G0A6	757 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	TIGD2	Q4W5G0	525 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	SPANXN4	Q5MJ08	99 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	NUP210L	Q5VU65	1888 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	C18orf63	Q68DL7	685 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	COX15	Q7KZN9	410 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	SNX32	Q86XE0	403 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	ZC3H7A	Q8IWR0	971 aa	Known RBP	12.75	□□□□□ -0.37
APTX-231	ENST00000494973	LRRC25	Q8N386	305 aa	Predicted RBP	12.75	□□□□□ -0.37
APTX-231	ENST00000494973	TRIML2	Q8N7C3	387 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	SLC38A9	Q8NBW4	561 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	GALNT6	Q8NCL4	622 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	OR9I1	Q8NGQ6	314 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	STT3B	Q8TCJ2	826 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	ZNF578	Q96N58	590 aa	Predicted RBP	12.75	□□□□□ -0.37
APTX-231	ENST00000494973	OR52E6	Q96RD3	313 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	BBS4	Q96RK4	519 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	CSF3R	Q99062	836 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	GPR87	Q9BY21	358 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	SEMA3G	Q9NS98	782 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973	C19orf25	Q9UFG5	118 aa	Predicted RBP	12.75	□□□□□ -0.37
APTX-231	ENST00000494973	NEUROG3	Q9Y4Z2	214 aa		12.75	□□□□□ -0.37
APTX-231	ENST00000494973		A0A1W2PNU3	283 aa	Predicted RBP	12.74	□□□□□ -0.37
APTX-231	ENST00000494973	VSTM2B	A6NLU5	285 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	RAD1	O60671	282 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	ERAL1	O75616	437 aa	Known RBP	12.74	□□□□□ -0.37
APTX-231	ENST00000494973	ZGLP1	P0C6A0	271 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	ESRRA	P11474	423 aa	Predicted RBP	12.74	□□□□□ -0.37
APTX-231	ENST00000494973	SLC5A2	P31639	672 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	GALNS	P34059	522 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	ID4	P47928	161 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	IGLV3-21	P80748	117 aa	Predicted RBP	12.74	□□□□□ -0.37
APTX-231	ENST00000494973	MC1R	Q01726	317 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	FOXC1	Q12948	553 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	MFSD4B	Q5TF39	518 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	MRPL14	Q6P1L8	145 aa	Known RBP	12.74	□□□□□ -0.37
APTX-231	ENST00000494973	GK5	Q6ZS86	529 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	FUNDC1	Q8IVP5	155 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	SCUBE1	Q8IWY4	988 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	OR7A2P	Q8NGA2	310 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	METTL21A	Q8WXB1	218 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	OR5P2	Q8WZ92	322 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	PMEPA1	Q969W9	287 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	KIAA1143	Q96AT1	154 aa	Predicted RBP	12.74	□□□□□ -0.37
APTX-231	ENST00000494973	EXOSC8	Q96B26	276 aa	Known RBP	12.74	□□□□□ -0.37
APTX-231	ENST00000494973	NACC2	Q96BF6	587 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	MOAP1	Q96BY2	351 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	ROPN1L	Q96C74	230 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	NSL1	Q96IY1	281 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	TEX37	Q96LM6	180 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	SPRY4	Q9C004	299 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	CHST8	Q9H2A9	424 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	EFCAB1	Q9HAE3	211 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	GID8	Q9NWU2	228 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	FOXJ2	Q9P0K8	574 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	KCND3	Q9UK17	655 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	CES1P1	Q9UKY3	287 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	EXO1	Q9UQ84	846 aa	Known RBP	12.74	□□□□□ -0.37
APTX-231	ENST00000494973	AK5	Q9Y6K8	562 aa		12.74	□□□□□ -0.37
APTX-231	ENST00000494973	C15orf38-AP3S2	A0A0A6YYH1	394 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973		A0A1W2PRB8	838 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	MYO1G	B0I1T2	1018 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	OR10H2	O60403	315 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	B4GALT2	O60909	372 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	ERN1	O75460	977 aa	Known RBP	12.73	□□□□□ -0.37
APTX-231	ENST00000494973	KCNH1	O95259	989 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	ATP1B1	P05026	303 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	HEXB	P07686	556 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	SLC35E2	P0CK97	266 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	LIPC	P11150	499 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	LAMP1	P11279	417 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	CPM	P14384	443 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	POR	P16435	677 aa	Predicted RBP	12.73	□□□□□ -0.37
APTX-231	ENST00000494973	IL12A	P29459	219 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	FOLR3	P41439	243 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	FRK	P42685	505 aa	Predicted RBP	12.73	□□□□□ -0.37
APTX-231	ENST00000494973	TRPC1	P48995	793 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	XK	P51811	444 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	MANF	P55145	182 aa	Known RBP	12.73	□□□□□ -0.37
APTX-231	ENST00000494973	SNRPN	P63162	240 aa	Known RBP	12.73	□□□□□ -0.37
APTX-231	ENST00000494973	FOLH1	Q04609	750 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	NKG7	Q16617	165 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	SYT16	Q17RD7	645 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	MLIP	Q5VWP3	458 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	BHLHB9	Q6PI77	547 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	FAM198B	Q6UWH4	519 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	C6orf89	Q6UWU4	347 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	CCDC121	Q6ZUS5	278 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	ARPIN	Q7Z6K5	226 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	ST13P4	Q8IZP2	240 aa	Predicted RBP	12.73	□□□□□ -0.37
APTX-231	ENST00000494973	DPP10	Q8N608	796 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	PLPP5	Q8NEB5	264 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	12.73	□□□□□ -0.37
APTX-231	ENST00000494973	RBM18	Q96H35	190 aa	Known RBP	12.73	□□□□□ -0.37
APTX-231	ENST00000494973	ART5	Q96L15	291 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	PTCHD1	Q96NR3	888 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	CCDC115	Q96NT0	180 aa		12.73	□□□□□ -0.37
APTX-231	ENST00000494973	DGAT2	Q96PD7	388 aa		12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms