RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 KIAA0930Q6ICG6 404 aaPredicted RBP5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 NEPROQ6NW34 567 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 ZNF549Q6P9A3 640 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 CNSTQ6PJW8 725 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 GDF7Q7Z4P5 450 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 VN1R4Q7Z5H5 301 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 PCGF5Q86SE9 256 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 MRGPRGQ86SM5 289 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 SDCCAG8Q86SQ7 713 aaPredicted RBP5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 CAND1Q86VP6 1230 aaKnown RBP5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 GAS2L3Q86XJ1 694 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 LDLRAD3Q86YD5 345 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 TXLNBQ8N3L3 684 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 SIRT6Q8N6T7 355 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 CSNK1A1LQ8N752 337 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 CCDC89Q8N998 374 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 GSDMBQ8TAX9 411 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 TM4SF19Q96DZ7 209 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 MMABQ96EY8 250 aaPredicted RBP5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 CABS1Q96KC9 395 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 CYTH2Q99418 400 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 TUBB6Q9BUF5 446 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 DRC3Q9H069 523 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 CCM2LQ9NUG4 571 aaPredicted RBP5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 INTS10Q9NVR2 710 aaKnown RBP5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 SYBUQ9NX95 663 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 STMN3Q9NZ72 180 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 COPG2Q9UBF2 871 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 ZNF835Q9Y2P0 537 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 CRYL1Q9Y2S2 319 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 DHRS7Q9Y394 339 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 CROCCQ5TZA2 2017 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 F8P00451 2351 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 PKDREJQ9NTG1 2253 aa5.99□□□□□ -1.45
PRPF40A-210ENST00000489741 NF1P21359 2839 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 MYO7BQ6PIF6 2116 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 A0A0A6YYC8 382 aaPredicted RBP5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 ZCWPW2A0A1B0GU75 182 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 FAM237BA0A1B0GVD1 139 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 ARHGAP10A1A4S6 786 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 MAGEB16A2A368 324 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 OR5H15A6NDH6 313 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 AHRRA9YTQ3 701 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 GOLGA8KD6RF30 607 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 PRSS44E7EML9 344 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 H0YIG0 161 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 GOLGA8TH3BQL2 631 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 I3L1I5 382 aaPredicted RBP5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 HAT1O14929 419 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 PRAMEF2O60811 474 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 AVILO75366 819 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 VPS26AO75436 327 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 RASAL1O95294 804 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 NSA2O95478 260 aaKnown RBP5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 CRYABP02511 175 aaKnown RBP5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 CATP04040 527 aaKnown RBP5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 MPC1LP0DKB6 136 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 ERVK-10P10266 1014 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 AGAP20933 346 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 NR4A1P22736 598 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 HRH2P25021 359 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 RPA3P35244 121 aaPredicted RBP5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 CA7P43166 264 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 PTTG1IPP53801 180 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 AP2B1P63010 937 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 TIAL1Q01085 375 aaKnown RBP eCLIP5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 EEF1A2Q05639 463 aaKnown RBP5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 RPS6KA1Q15418 735 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 ZNF630Q2M218 657 aaPredicted RBP5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 FAAH2Q6GMR7 532 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 HIBCHQ6NVY1 386 aaPredicted RBP5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 GFRALQ6UXV0 394 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 Q6ZPB1 254 aaPredicted RBP5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 PRSS41Q7RTY9 318 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 MCEMP1Q8IX19 187 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 ACBD4Q8NC06 268 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 PLPP5Q8NEB5 264 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 ZFP28Q8NHY6 868 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 ADAMTS18Q8TE60 1221 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 SKA2Q8WVK7 121 aaPredicted RBP5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 KCNJ9Q92806 393 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 FAM136AQ96C01 138 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 NPAS2Q99743 824 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 ADI1Q9BV57 179 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 MLST8Q9BVC4 326 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 VN1R1Q9GZP7 353 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 BCO1Q9HAY6 547 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 DMRT3Q9NQL9 472 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 FAM114A2Q9NRY5 505 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 TMEM184CQ9NVA4 438 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 TAC3Q9UHF0 121 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 MCM8Q9UJA3 840 aa5.98□□□□□ -1.45
PRPF40A-210ENST00000489741 PCNX1Q96RV3 2341 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 ASPDHA6ND91 283 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 OR2W5A6NFC9 320 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 EIF3FO00303 357 aaPredicted RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 RNASET2O00584 256 aaKnown RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 PFDN6O15212 129 aa5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 LCMT2O60294 686 aaKnown RBP5.97□□□□□ -1.45
PRPF40A-210ENST00000489741 UNC5CO95185 931 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms