RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 OR5T3Q8NGG3 340 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 OR4A15Q8NGL6 344 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 ZFP28Q8NHY6 868 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 TANKQ92844 425 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 UCN3Q969E3 161 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 ZNF681Q96N22 645 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 CSF3RQ99062 836 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 NDC1Q9BTX1 674 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 TRIM4Q9C037 500 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 RPF2Q9H7B2 306 aaKnown RBP13.35□□□□□ -0.27
VPS26A-205ENST00000489656 GIMAP4Q9NUV9 329 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 FAM86C1Q9NVL1 165 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 C5AR2Q9P296 337 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.35□□□□□ -0.27
VPS26A-205ENST00000489656 CDC14AQ9UNH5 594 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 ENTPD4Q9Y227 616 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 L3MBTL1Q9Y468 752 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 PCDHGA1Q9Y5H4 931 aa13.35□□□□□ -0.27
VPS26A-205ENST00000489656 RFPL3O75679 317 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 GSNP06396 782 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 IFI6P09912 130 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 FGF5P12034 268 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 EFNA1P20827 205 aaPredicted RBP13.34□□□□□ -0.27
VPS26A-205ENST00000489656 CSTF2P33240 577 aaKnown RBP eCLIP13.34□□□□□ -0.27
VPS26A-205ENST00000489656 PDX1P52945 283 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 MANFP55145 182 aaKnown RBP13.34□□□□□ -0.27
VPS26A-205ENST00000489656 SHC2P98077 582 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 SELPLGQ14242 412 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 GTDC1Q4AE62 458 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 PHF19Q5T6S3 580 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 C6orf163Q5TEZ5 329 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 RHBDD2Q6NTF9 364 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 RBM44Q6ZP01 1051 aaKnown RBP13.34□□□□□ -0.27
VPS26A-205ENST00000489656 ZNF621Q6ZSS3 439 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 GLRX5Q86SX6 157 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 AGBL5Q8NDL9 886 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 OR4K14Q8NGD5 310 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 ZFP90Q8TF47 636 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 CNRIP1Q96F85 164 aaPredicted RBP13.34□□□□□ -0.27
VPS26A-205ENST00000489656 AMDHD1Q96NU7 426 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 OR6C1Q96RD1 312 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 BBS4Q96RK4 519 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 MUC13Q9H3R2 512 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 GLIPR2Q9H4G4 154 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 KAT8Q9H7Z6 458 aaKnown RBP13.34□□□□□ -0.27
VPS26A-205ENST00000489656 RARRES3Q9UL19 164 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 CORO2BQ9UQ03 480 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 POMPQ9Y244 141 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 ZNF780BQ9Y6R6 833 aa13.34□□□□□ -0.27
VPS26A-205ENST00000489656 A0A1B0GX78 115 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 GLOD5A6NK44 160 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 EVPLLA8MZ36 301 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 TMX2-CTNND1H3BSU7 103 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 CLIC1O00299 241 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 NVLO15381 856 aaKnown RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 SORBS2O94875 1100 aaKnown RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 ABCB1P08183 1280 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 HBQ1P09105 142 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 GPX2P18283 190 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 CSNK2A2P19784 350 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 IL10P22301 178 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 UQCRC2P22695 453 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 PPP2R1BP30154 601 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 GSK3BP49841 420 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 LIMK1P53667 647 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 MTPNP58546 118 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 LIPEQ05469 1076 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 ABHD18Q0P651 414 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 TRAP1Q12931 704 aaKnown RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 BNIP2Q12982 314 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 GAB1Q13480 694 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 TRIM25Q14258 630 aaKnown RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 IL11RAQ14626 422 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 C16orf72Q14CZ0 275 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 STPG1Q5TH74 334 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 CDCP2Q5VXM1 449 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 TMEM64Q6YI46 380 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 TTLL10Q6ZVT0 673 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 B3GNT8Q7Z7M8 397 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 CALHM3Q86XJ0 350 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 PTRH1Q86Y79 214 aaKnown RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 ZNF595Q8IYB9 648 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 DTWD1Q8N5C7 304 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 BMPERQ8N8U9 685 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 SUN3Q8TAQ9 357 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 ASB9Q96DX5 294 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 MMABQ96EY8 250 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 DPH2Q9BQC3 489 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 SPATA9Q9BWV2 254 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 RAD21L1Q9H4I0 556 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 ALG2Q9H553 416 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 IKZF5Q9H5V7 419 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 DENND2DQ9H6A0 471 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 EPS8L2Q9H6S3 715 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 TPT1P8Q9HAU6 139 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 SIRT3Q9NTG7 399 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 MRPS33Q9Y291 106 aaKnown RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 PCDHB3Q9Y5E6 796 aa13.33□□□□□ -0.28
VPS26A-205ENST00000489656 EP300Q09472 2414 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-205ENST00000489656 ZNF292O60281 2723 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms