RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 YOD1Q5VVQ6 348 aaPredicted RBP18.3■□□□□ 0.52
CCM2-216ENST00000488727 GARNL3Q5VVW2 1013 aa18.3■□□□□ 0.52
CCM2-216ENST00000488727 SLC2A7Q6PXP3 512 aa18.3■□□□□ 0.52
CCM2-216ENST00000488727 DLEU7Q6UYE1 221 aa18.3■□□□□ 0.52
CCM2-216ENST00000488727 PRSS41Q7RTY9 318 aa18.3■□□□□ 0.52
CCM2-216ENST00000488727 PACRGLQ8N7B6 248 aa18.3■□□□□ 0.52
CCM2-216ENST00000488727 LRFN5Q96NI6 719 aa18.3■□□□□ 0.52
CCM2-216ENST00000488727 GBP5Q96PP8 586 aa18.3■□□□□ 0.52
CCM2-216ENST00000488727 HBEGFQ99075 208 aa18.3■□□□□ 0.52
CCM2-216ENST00000488727 ZBTB18Q99592 522 aa18.3■□□□□ 0.52
CCM2-216ENST00000488727 COQ10BQ9H8M1 238 aa18.3■□□□□ 0.52
CCM2-216ENST00000488727 DKK4Q9UBT3 224 aa18.3■□□□□ 0.52
CCM2-216ENST00000488727 EGFL7Q9UHF1 273 aa18.3■□□□□ 0.52
CCM2-216ENST00000488727 A0A1B0GX78 115 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 C1QTNF9BB2RNN3 333 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 NPIPB8E9PQR5 432 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 DSCR3O14972 297 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 TLX3O43711 291 aaPredicted RBP18.29■□□□□ 0.52
CCM2-216ENST00000488727 SH3BGRLO75368 114 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 TIPRLO75663 272 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 B3GALT4O96024 378 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 TGFB1P01137 390 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 KRT6AP02538 564 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 KRT6BP04259 564 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 HBQ1P09105 142 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 C1QTNF9P0C862 333 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 PCSK2P16519 638 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 ALAS2P22557 587 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 SERPINB1P30740 379 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 KRT6CP48668 564 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 RPS13P62277 151 aaKnown RBP18.29■□□□□ 0.52
CCM2-216ENST00000488727 SGO1Q5FBB7 561 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 TBCELQ5QJ74 424 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 LCN10Q6JVE6 187 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 PROSER1Q86XN7 944 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 DTX1Q86Y01 620 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 SPPL2CQ8IUH8 684 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 GALNT4Q8N4A0 578 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 METTL27Q8N6F8 245 aaPredicted RBP18.29■□□□□ 0.52
CCM2-216ENST00000488727 PAPD5Q8NDF8 572 aaKnown RBP18.29■□□□□ 0.52
CCM2-216ENST00000488727 MS4A6EQ96DS6 147 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 OSBPL11Q9BXB4 747 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 SEMA6AQ9H2E6 1030 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 ELOVL6Q9H5J4 265 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 LRTM1Q9HBL6 345 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 NDOR1Q9UHB4 597 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 ADGRE2Q9UHX3 823 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 SNX6Q9UNH7 406 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 SERTM1A2A2V5 107 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 MEN1O00255 615 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 ETHE1O95571 254 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 PDYNP01213 254 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 ZNF888P0CJ79 500 aaPredicted RBP18.29■□□□□ 0.52
CCM2-216ENST00000488727 FCGR1AP12314 374 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 IL1RNP18510 177 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 PAX7P23759 505 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 PRPH2P23942 346 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 FAM53BQ14153 422 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 RNF220Q5VTB9 566 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 PPP4R4Q6NUP7 873 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 C6orf15Q6UXA7 325 aaPredicted RBP18.29■□□□□ 0.52
CCM2-216ENST00000488727 ZNF517Q6ZMY9 492 aaPredicted RBP18.29■□□□□ 0.52
CCM2-216ENST00000488727 OR8J3Q8NGG0 315 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 UTP15Q8TED0 518 aaKnown RBP18.29■□□□□ 0.52
CCM2-216ENST00000488727 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.29■□□□□ 0.52
CCM2-216ENST00000488727 F2RL3Q96RI0 385 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 OR51B5Q9H339 312 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 CCDC86Q9H6F5 360 aaKnown RBP18.29■□□□□ 0.52
CCM2-216ENST00000488727 AGPAT4Q9NRZ5 378 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 UBAP1Q9NZ09 502 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 SLAMF8Q9P0V8 285 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 SLC22A7Q9Y694 548 aa18.29■□□□□ 0.52
CCM2-216ENST00000488727 A0A0A6YYC8 382 aaPredicted RBP18.28■□□□□ 0.52
CCM2-216ENST00000488727 I3L1I5 382 aaPredicted RBP18.28■□□□□ 0.52
CCM2-216ENST00000488727 FOXE1O00358 373 aaPredicted RBP18.28■□□□□ 0.52
CCM2-216ENST00000488727 RSL1D1O76021 490 aaKnown RBP18.28■□□□□ 0.52
CCM2-216ENST00000488727 SMIM10L1P0DMW3 83 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 RAB8AP61006 207 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 STXBP1P61764 594 aaKnown RBP18.28■□□□□ 0.52
CCM2-216ENST00000488727 TGIF1Q15583 401 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 NDUFA9Q16795 377 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 IMPG1Q17R60 797 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 INTS11Q5TA45 600 aaKnown RBP18.28■□□□□ 0.52
CCM2-216ENST00000488727 FOXB2Q5VYV0 432 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 FAM199XQ6PEV8 388 aaPredicted RBP18.28■□□□□ 0.52
CCM2-216ENST00000488727 CHERPQ8IWX8 916 aaKnown RBP18.28■□□□□ 0.52
CCM2-216ENST00000488727 OR9A4Q8NGU2 314 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 SELENOMQ8WWX9 145 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 FGF11Q92914 225 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 CMTM7Q96FZ5 175 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 SMIM10Q96HG1 83 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 CGREF1Q99674 301 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 REXO4Q9GZR2 422 aaKnown RBP18.28■□□□□ 0.52
CCM2-216ENST00000488727 ZNF696Q9H7X3 374 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 C8orf4Q9NR00 106 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 C1orf109Q9NX04 203 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 MAU2Q9Y6X3 613 aa18.28■□□□□ 0.52
CCM2-216ENST00000488727 APC2O95996 2303 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 C7orf72A4D263 438 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 ERI3O43414 337 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms