RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-215	ENST00000484555	CD8B2	A6NJW9	211 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	ZSCAN12	O43309	604 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	ETHE1	O95571	254 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	KRT14	P02533	472 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	C1QA	P02745	245 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	GNAZ	P19086	355 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	TNNI3	P19429	210 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	CTSS	P25774	331 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	OPRM1	P35372	400 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	PLA2G16	P53816	162 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	KCNJ2	P63252	427 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	ASPH	Q12797	758 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	DUSP8	Q13202	625 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	TRIM40	Q6P9F5	258 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	CAPN12	Q6ZSI9	719 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	PM20D2	Q8IYS1	436 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	RASGEF1C	Q8N431	466 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	LIX1	Q8N485	282 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	SIMC1	Q8NDZ2	872 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	SLC22A8	Q8TCC7	542 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	SPACA9	Q96E40	222 aa	Predicted RBP	11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	HSPBAP1	Q96EW2	488 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	DACH2	Q96NX9	599 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	YIPF4	Q9BSR8	244 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	REXO4	Q9GZR2	422 aa	Known RBP	11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	EPB41L4B	Q9H329	900 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	LYRM4	Q9HD34	91 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	PRDM7	Q9NQW5	492 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	COPS7A	Q9UBW8	275 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	IKZF3	Q9UKT9	509 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	CNOT11	Q9UKZ1	510 aa	Known RBP	11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	VWA7	Q9Y334	891 aa		11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	11.42	□□□□□ -0.58
PABPC4-215	ENST00000484555	MYOCOS	A0A1B0GUC4	107 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	ANKRD33B	A6NCL7	494 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	MBD3L3	A6NE82	208 aa	Predicted RBP	11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	GOLGA8M	H3BSY2	632 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	IGKV3-11	P04433	115 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	PGAM1	P18669	254 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	CERS1	P27544	350 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	HNMT	P50135	292 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	WNT3	P56703	355 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	IGLV3-21	P80748	117 aa	Predicted RBP	11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	CRYM	Q14894	314 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	NHSL2	Q5HYW2	709 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	VASN	Q6EMK4	673 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	KRT78	Q8N1N4	520 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	CIART	Q8N365	385 aa	Predicted RBP	11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	NAT8L	Q8N9F0	302 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	SREK1	Q8WXA9	508 aa	Known RBP	11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	NANOS1	Q8WY41	292 aa	Known RBP	11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	ISL2	Q96A47	359 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	ANKRD9	Q96BM1	317 aa	Predicted RBP	11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	NTNG2	Q96CW9	530 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	SENP5	Q96HI0	755 aa	Predicted RBP	11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	WDR83	Q9BRX9	315 aa	Known RBP	11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	BDH2	Q9BUT1	245 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	REPIN1	Q9BWE0	567 aa	Known RBP	11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	CALHM2	Q9HA72	323 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	GUCA1B	Q9UMX6	200 aa		11.41	□□□□□ -0.58
PABPC4-215	ENST00000484555	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	ANKDD1B	A6NHY2	528 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	LDB3	O75112	727 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	TRIM3	O75382	744 aa	Predicted RBP	11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	TTC4	O95801	387 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	HPN	P05981	417 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	FBXO45	P0C2W1	286 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	PCSK6	P29122	969 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	SLC6A12	P48065	614 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	TRPC1	P48995	793 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	BIK	Q13323	160 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	SLBP	Q14493	270 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555		Q5PR19	223 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	TBCEL	Q5QJ74	424 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	PRAMEF20	Q5VT98	475 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	FAM45BP	Q6NSW5	357 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	TTC27	Q6P3X3	843 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	VN1R5	Q7Z5H4	357 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	P3H2	Q8IVL5	708 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	C9orf40	Q8IXQ3	194 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	FAM45A	Q8TCE6	357 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	CCT6B	Q92526	530 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	RUNDC3B	Q96NL0	473 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	CAPS2	Q9BXY5	557 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	ROGDI	Q9GZN7	287 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	UBQLN3	Q9H347	655 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	EHD1	Q9H4M9	534 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	GPRC5B	Q9NZH0	403 aa		11.4	□□□□□ -0.58
PABPC4-215	ENST00000484555	JMJD1C	Q15652	2540 aa		11.4	□□□□□ -0.59
PABPC4-215	ENST00000484555		H7C1Q1	480 aa		11.39	□□□□□ -0.59
PABPC4-215	ENST00000484555	CES2	O00748	559 aa		11.39	□□□□□ -0.59
PABPC4-215	ENST00000484555	WDR47	O94967	919 aa		11.39	□□□□□ -0.59
PABPC4-215	ENST00000484555	GDF1	P27539	372 aa		11.39	□□□□□ -0.59
PABPC4-215	ENST00000484555	SERPINB3	P29508	390 aa		11.39	□□□□□ -0.59

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