RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 CCT6BQ92526 530 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 SENP5Q96HI0 755 aaPredicted RBP11.83□□□□□ -0.52
UBR4-213ENST00000483922 EXO5Q9H790 373 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 NT5DC2Q9H857 520 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 HOMER3Q9NSC5 361 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 ADAM21Q9UKJ8 722 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 PSAT1Q9Y617 370 aa11.83□□□□□ -0.52
UBR4-213ENST00000483922 CLCA1A8K7I4 914 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 AHRRA9YTQ3 701 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 FAM47E-STBD1D6RA91 191 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 RTCAO00442 366 aaKnown RBP11.82□□□□□ -0.52
UBR4-213ENST00000483922 TRIM3O75382 744 aaPredicted RBP11.82□□□□□ -0.52
UBR4-213ENST00000483922 WDR47O94967 919 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 ACSL3O95573 720 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 C1QAP02745 245 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 FREM3P0C091 2139 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 GNAZP19086 355 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 EPORP19235 508 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 PEX19P40855 299 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 MTTPP55157 894 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 DCAF7P61962 342 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 IGLV3-21P80748 117 aaPredicted RBP11.82□□□□□ -0.52
UBR4-213ENST00000483922 STX4Q12846 297 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 FOXF2Q12947 444 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 DCST1Q5T197 706 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 BICRALQ6AI39 1079 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 GALNT7Q86SF2 657 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 RASGEF1CQ8N431 466 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 NUBPLQ8TB37 319 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 MAGOHBQ96A72 148 aaKnown RBP11.82□□□□□ -0.52
UBR4-213ENST00000483922 ESAMQ96AP7 390 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 RHBDF1Q96CC6 855 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 NTNG2Q96CW9 530 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 SPACA9Q96E40 222 aaPredicted RBP11.82□□□□□ -0.52
UBR4-213ENST00000483922 CERS2Q96G23 380 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 TMEM79Q9BSE2 394 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 PRDM14Q9GZV8 571 aa11.82□□□□□ -0.52
UBR4-213ENST00000483922 MRPS33Q9Y291 106 aaKnown RBP11.82□□□□□ -0.52
UBR4-213ENST00000483922 FGF17O60258 216 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 H2AFYO75367 372 aaKnown RBP11.81□□□□□ -0.52
UBR4-213ENST00000483922 CLPSP04118 112 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 ZNF37AP17032 561 aaPredicted RBP11.81□□□□□ -0.52
UBR4-213ENST00000483922 SLCO1A2P46721 670 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 KCNJ2P63252 427 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 CDKL1Q00532 357 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 TSNQ15631 228 aaKnown RBP11.81□□□□□ -0.52
UBR4-213ENST00000483922 CYP1B1Q16678 543 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 SPANXN3Q5MJ09 141 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 HP1BP3Q5SSJ5 553 aaPredicted RBP11.81□□□□□ -0.52
UBR4-213ENST00000483922 VASNQ6EMK4 673 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 TMEM64Q6YI46 380 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 MAATS1Q7Z4T9 603 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 GAS2L3Q86XJ1 694 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 SPC24Q8NBT2 197 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 NUDT8Q8WV74 236 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 UCN3Q969E3 161 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 COX4I2Q96KJ9 171 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 RUNDC3BQ96NL0 473 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 SORBS1Q9BX66 1292 aaKnown RBP11.81□□□□□ -0.52
UBR4-213ENST00000483922 UBQLN3Q9H347 655 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 NEUROD4Q9HD90 331 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 EDARQ9UNE0 448 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 SLC6A5Q9Y345 797 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 OARD1Q9Y530 152 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 ATRQ13535 2644 aa11.81□□□□□ -0.52
UBR4-213ENST00000483922 NINQ8N4C6 2090 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 MXRA5Q9NR99 2828 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 TLN2Q9Y4G6 2542 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 SIAH2O43255 324 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 PRKRAO75569 313 aaKnown RBP11.8□□□□□ -0.52
UBR4-213ENST00000483922 FBXO45P0C2W1 286 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 ATP5A1P25705 553 aaKnown RBP11.8□□□□□ -0.52
UBR4-213ENST00000483922 STT3AP46977 705 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 TAS2R39P59534 338 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 SERTAD2Q14140 314 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 DOC2AQ14183 400 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 EFTUD2Q15029 972 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBR4-213ENST00000483922 NSUN5P2Q63ZY6 315 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 FAM45BPQ6NSW5 357 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 TRIM40Q6P9F5 258 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 CCDC137Q6PK04 289 aaKnown RBP11.8□□□□□ -0.52
UBR4-213ENST00000483922 PLXDC2Q6UX71 529 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 LACC1Q8IV20 430 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 PPIL6Q8IXY8 311 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 RNF175Q8N4F7 328 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 ACOT4Q8N9L9 421 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 C9orf106Q8NAJ2 232 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 TTLQ8NG68 377 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 FAM45AQ8TCE6 357 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 WDYHV1Q96HA8 205 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 JSRP1Q96MG2 331 aaPredicted RBP11.8□□□□□ -0.52
UBR4-213ENST00000483922 ZNF395Q9H8N7 513 aaPredicted RBP11.8□□□□□ -0.52
UBR4-213ENST00000483922 LYRM4Q9HD34 91 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 LZTFL1Q9NQ48 299 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 BEX4Q9NWD9 120 aaPredicted RBP11.8□□□□□ -0.52
UBR4-213ENST00000483922 QPCTLQ9NXS2 382 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 MTRF1LQ9UGC7 380 aaKnown RBP11.8□□□□□ -0.52
UBR4-213ENST00000483922 FOXD3Q9UJU5 478 aaPredicted RBP11.8□□□□□ -0.52
UBR4-213ENST00000483922 STAB1Q9NY15 2570 aa11.8□□□□□ -0.52
UBR4-213ENST00000483922 CSPG4Q6UVK1 2322 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms