RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 SYT14Q8NB59 555 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 CHTF18Q8WVB6 975 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 SNAPC3Q92966 411 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 REPS1Q96D71 796 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 DIRAS2Q96HU8 199 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 FRMD6Q96NE9 622 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 WDFY2Q96P53 400 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 NRTNQ99748 197 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 RSPO3Q9BXY4 272 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 POLR2J2Q9GZM3 115 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 FAM83DQ9H4H8 585 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 RNF121Q9H920 327 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 TOR4AQ9NXH8 423 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 REV3LO60673 3130 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 PLXNB3Q9ULL4 1909 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 GNG14A0A1W2PPG7 69 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 FABP12A6NFH5 140 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 MEN1O00255 615 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 TPST2O60704 377 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 TMCC2O75069 709 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 AP2A2O94973 939 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 LRG1P02750 347 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 ALPPP05187 535 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 CCNYL3P0C7X3 344 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 RHAGQ02094 409 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 RUNX1T1Q06455 604 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 C22orf42Q6IC83 251 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 ZNF770Q6IQ21 691 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 PHC2Q8IXK0 858 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 SIX5Q8N196 739 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 ZNF557Q8N988 423 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 RASGEF1AQ8N9B8 481 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 OR4M1Q8NGD0 313 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 CREB3L4Q8TEY5 395 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC35A5Q9BS91 424 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 RNF208Q9H0X6 261 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 THSD1Q9NS62 852 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 PLEKHB1Q9UF11 243 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 RAB23Q9ULC3 237 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 STUB1Q9UNE7 303 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 SH2B3Q9UQQ2 575 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 HYKKA2RU49 373 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 SAP18O00422 153 aaKnown RBP12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 ZNF780AO75290 641 aaPredicted RBP12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 SEMA7AO75326 666 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC16A8O95907 504 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 TRAPPC2P0DI81 140 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 TRAPPC2BP0DI82 140 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 CSTF2P33240 577 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 LIM2P55344 173 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 NTHL1P78549 312 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 MESP2Q0VG99 397 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 FAPQ12884 760 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC5A12Q1EHB4 618 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 OTOP2Q7RTS6 562 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 C11orf74Q86VG3 221 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 BPHLQ86WA6 291 aaPredicted RBP12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 OR9Q1Q8NGQ5 310 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 GRPEL2Q8TAA5 225 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC25A46Q96AG3 418 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 SPATA9Q9BWV2 254 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 MGAT4DA6NG13 374 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 ZSCAN5BA6NJL1 495 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 FAM25AB3EWG3 89 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 FAM25CB3EWG5 89 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 FAM25GB3EWG6 89 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 TLR4O00206 839 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 RFXAPO00287 272 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 IFI30P13284 250 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 CSF2RAP15509 400 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 TIMP2P16035 220 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 PRIM2P49643 509 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 HNMTP50135 292 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 TSTA3Q13630 321 aaPredicted RBP12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 PUM1Q14671 1186 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 SEC23BQ15437 767 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 TEAD2Q15562 447 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 PRSS53Q2L4Q9 553 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 MPEG1Q2M385 716 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 LY6G5CQ5SRR4 150 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 GCNT6Q5T4J0 391 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC38A6Q8IZM9 456 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 FAM181AQ8N9Y4 354 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 FAM46DQ8NEK8 389 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 VPS37AQ8NEZ2 397 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 OR5H6Q8NGV6 325 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 CPEB1Q9BZB8 566 aaKnown RBP12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 C1GALT1Q9NS00 363 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 TXNL4BQ9NX01 149 aaKnown RBP12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 NDUFB11Q9NX14 153 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 SEC14L4Q9UDX3 406 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 MALT1Q9UDY8 824 aa12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 NDRG2Q9UN36 371 aaKnown RBP12.67□□□□□ -0.38
PDZRN3-208ENST00000479530 SZT2Q5T011 3432 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 IQCMA0A1B0GVH7 501 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 TRBC2A0A5B9 178 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 FGF18O76093 207 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 APOL3O95236 402 aa12.66□□□□□ -0.38
PDZRN3-208ENST00000479530 TYRP14679 529 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms