RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ASTLQ6HA08 431 aaPredicted RBP10.52□□□□□ -0.73
COL27A1-204ENST00000477421 USP43Q70EL4 1123 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 SPRED1Q7Z699 444 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 FGD2Q7Z6J4 655 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 TOX2Q96NM4 488 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 GAL3ST4Q96RP7 486 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 TMED9Q9BVK6 235 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 CA5BQ9Y2D0 317 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 WDR45Q9Y484 360 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 FAM240BA0A1B0GVZ2 78 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 FAM86C2PA6NEL3 165 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 MPZL2O60487 215 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 ALOX5P09917 674 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 GADD45AP24522 165 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 AK4P27144 223 aaPredicted RBP10.52□□□□□ -0.73
COL27A1-204ENST00000477421 MVKQ03426 396 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 DMPKQ09013 629 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 ITPRIPL2Q3MIP1 535 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 PLET1Q6UQ28 207 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 CYHR1Q6ZMK1 362 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 AKAP14Q86UN6 197 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 PTRH1Q86Y79 214 aaKnown RBP10.52□□□□□ -0.73
COL27A1-204ENST00000477421 MMP21Q8N119 569 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 SPRTNQ9H040 489 aaPredicted RBP10.52□□□□□ -0.73
COL27A1-204ENST00000477421 ZBP1Q9H171 429 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 MAGIXQ9H6Y5 334 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 TMEM27Q9HBJ8 222 aa10.52□□□□□ -0.73
COL27A1-204ENST00000477421 SH3PXD2BA1X283 911 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 ASPDHA6ND91 283 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 EIF3FO00303 357 aaPredicted RBP10.51□□□□□ -0.73
COL27A1-204ENST00000477421 VEGFDO43915 354 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 FZD6O60353 706 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 GPR37L1O60883 481 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 CDRT1O95170 752 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 KCNK5O95279 499 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 CD160O95971 181 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 HNRNPA1P09651 372 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL27A1-204ENST00000477421 IL1RNP18510 177 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 CD72P21854 359 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 CA5AP35218 305 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 ZNF852Q6ZMS4 543 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 KLHDC8AQ8IYD2 350 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 FBXO15Q8NCQ5 510 aaPredicted RBP10.51□□□□□ -0.73
COL27A1-204ENST00000477421 OR5P2Q8WZ92 322 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 NXPE3Q969Y0 559 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 KRBA1A5PL33 1030 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 FABP12A6NFH5 140 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 PRKRAO75569 313 aaKnown RBP10.51□□□□□ -0.73
COL27A1-204ENST00000477421 CSF2P04141 144 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 SRPRAP08240 638 aaKnown RBP10.51□□□□□ -0.73
COL27A1-204ENST00000477421 HSD17B2P37059 387 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 PIK3CBP42338 1070 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 SPCS2Q15005 226 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 PYCR3Q53H96 274 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 CEP78Q5JTW2 689 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 SERPINA11Q86U17 422 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 CHCHD4Q8N4Q1 142 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 ZNF300Q96RE9 604 aaPredicted RBP10.51□□□□□ -0.73
COL27A1-204ENST00000477421 ADAM30Q9UKF2 790 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 PEX16Q9Y5Y5 336 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 RFXAPO00287 272 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 KLF8O95600 359 aaPredicted RBP10.51□□□□□ -0.73
COL27A1-204ENST00000477421 CELP19835 753 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 PRLHRP49683 370 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 DAPP51397 102 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 CRISP1P54107 249 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 PRRT3Q5FWE3 981 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.51□□□□□ -0.73
COL27A1-204ENST00000477421 DPPA4Q7L190 304 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 IZUMO1Q8IYV9 350 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 OR6K6Q8NGW6 343 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 OR51A7Q8NH64 312 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 ARRDC3Q96B67 414 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 TESCQ96BS2 214 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 MCHR1Q99705 422 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 MAPKAP1Q9BPZ7 522 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 AMBRA1Q9C0C7 1298 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 BHLHE41Q9C0J9 482 aaPredicted RBP10.51□□□□□ -0.73
COL27A1-204ENST00000477421 NDEL1Q9GZM8 345 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 MBD1Q9UIS9 605 aaPredicted RBP10.51□□□□□ -0.73
COL27A1-204ENST00000477421 RP1P56715 2156 aa10.51□□□□□ -0.73
COL27A1-204ENST00000477421 EPHA2P29317 976 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 IL12RB1P42701 662 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 CAPZA2P47755 286 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 SLC9A3P48764 834 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 LBX1P52954 281 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 B4GALNT1Q00973 533 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 TIAL1Q01085 375 aaKnown RBP eCLIP10.5□□□□□ -0.731e-10■■■■■ 29.6
COL27A1-204ENST00000477421 GRSF1Q12849 480 aaKnown RBP eCLIP10.5□□□□□ -0.732e-9■□□□□ 11
COL27A1-204ENST00000477421 EIF4HQ15056 248 aaKnown RBP10.5□□□□□ -0.73
COL27A1-204ENST00000477421 AMZ1Q400G9 498 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 FAM78AQ5JUQ0 283 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 TTLQ8NG68 377 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 PMEPA1Q969W9 287 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ECHDC3Q96DC8 303 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 LRR1Q96L50 414 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 GAL3ST1Q99999 423 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 QRSL1Q9H0R6 528 aaKnown RBP10.5□□□□□ -0.73
COL27A1-204ENST00000477421 TAS2R16Q9NYV7 291 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ACSL5Q9ULC5 683 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms