RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 GARNL3Q5VVW2 1013 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 NKAIN2Q5VXU1 208 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 ANGPTL8Q6UXH0 198 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 PRSS41Q7RTY9 318 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 ERMP1Q7Z2K6 904 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 RNF130Q86XS8 419 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 EID3Q8N140 333 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 LILRA2Q8N149 483 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 CA13Q8N1Q1 262 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 TMEM102Q8N9M5 508 aaPredicted RBP8.86□□□□□ -0.99
VPS52-216ENST00000471309 C11orf65Q8NCR3 313 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 OR5AK3PQ8NH89 298 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 SUN3Q8TAQ9 357 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 SFXN5Q8TD22 340 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 ADAMTS18Q8TE60 1221 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 UCN3Q969E3 161 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 FAM162AQ96A26 154 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 MOAP1Q96BY2 351 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 CNRIP1Q96F85 164 aaPredicted RBP8.86□□□□□ -0.99
VPS52-216ENST00000471309 ZNF681Q96N22 645 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 BBS4Q96RK4 519 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 PKP2Q99959 881 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 DPH2Q9BQC3 489 aaPredicted RBP8.86□□□□□ -0.99
VPS52-216ENST00000471309 TACO1Q9BSH4 297 aaKnown RBP8.86□□□□□ -0.99
VPS52-216ENST00000471309 UGT2B28Q9BY64 529 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 GLIPR2Q9H4G4 154 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 TMEM38AQ9H6F2 299 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 FSCN3Q9NQT6 498 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 DCAF13Q9NV06 445 aaKnown RBP8.86□□□□□ -0.99
VPS52-216ENST00000471309 GPATCH2Q9NW75 528 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 ACSL6Q9UKU0 697 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 PSME2Q9UL46 239 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 C15orf41Q9Y2V0 281 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 ZNF780BQ9Y6R6 833 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 U3KQA8 63 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 ZNF860A6NHJ4 632 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 PATE3B3GLJ2 98 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 SIGLEC6O43699 453 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 PCDHGA12O60330 932 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 ERAL1O75616 437 aaKnown RBP8.85□□□□□ -0.99
VPS52-216ENST00000471309 NTRK1P04629 796 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 CTSBP07858 339 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 SYPP08247 313 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 IFI6P09912 130 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 MSL3P1P0C860 447 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 RAP2AP10114 183 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 ETFAP13804 333 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 CSNK2A2P19784 350 aaPredicted RBP8.85□□□□□ -0.99
VPS52-216ENST00000471309 PEX2P28328 305 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 GPC1P35052 558 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 CRATP43155 626 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 RAB38P57729 211 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 OLR1P78380 273 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 CFHR1Q03591 330 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 FAM53BQ14153 422 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 ZNF630Q2M218 657 aaPredicted RBP8.85□□□□□ -0.99
VPS52-216ENST00000471309 SPDYE7PQ495Y7 208 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 FAM98BQ52LJ0 330 aaKnown RBP8.85□□□□□ -0.99
VPS52-216ENST00000471309 COX20Q5RI15 118 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 FAM180BQ6P0A1 224 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 SLC30A8Q8IWU4 369 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 Q8N9G6 341 aaPredicted RBP8.85□□□□□ -0.99
VPS52-216ENST00000471309 CATSPER1Q8NEC5 780 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 ADCY4Q8NFM4 1077 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 LRTOMTQ8WZ04 291 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 NAT6Q93015 286 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 LOXL4Q96JB6 756 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 SLC41A2Q96JW4 573 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 RNF145Q96MT1 663 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 CSF3RQ99062 836 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 ASPSCR1Q9BZE9 553 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 ZNF768Q9H5H4 540 aaKnown RBP8.85□□□□□ -0.99
VPS52-216ENST00000471309 MAGIXQ9H6Y5 334 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 YY1AP1Q9H869 796 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 CLK4Q9HAZ1 481 aaKnown RBP8.85□□□□□ -0.99
VPS52-216ENST00000471309 AGPAT4Q9NRZ5 378 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 STARD5Q9NSY2 213 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 THUMPD1Q9NXG2 353 aaKnown RBP8.85□□□□□ -0.99
VPS52-216ENST00000471309 KLHL3Q9UH77 587 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 FAF1Q9UNN5 650 aaPredicted RBP8.85□□□□□ -0.99
VPS52-216ENST00000471309 SAMD4AQ9UPU9 718 aaKnown RBP8.85□□□□□ -0.99
VPS52-216ENST00000471309 AURKCQ9UQB9 309 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 SNX8Q9Y5X2 465 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 BDP1A6H8Y1 2624 aa8.85□□□□□ -0.99
VPS52-216ENST00000471309 HYKKA2RU49 373 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 BLACEA4D250 179 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 EME2A4GXA9 379 aaPredicted RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 WASHC1A8K0Z3 465 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 SGK494L7N484 410 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 CYR61O00622 381 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 B4GALT2O60909 372 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 RDH16O75452 317 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 TIPRLO75663 272 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 SLITRK5O94991 958 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 NSA2O95478 260 aaKnown RBP8.84□□□□□ -0.99
VPS52-216ENST00000471309 SERPINA1P01009 418 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 FHP07954 510 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 NUDT7P0C024 238 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 ANKRD34CP0C6C1 535 aa8.84□□□□□ -0.99
VPS52-216ENST00000471309 ARAFP10398 606 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms