RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SYNDIG1LA6NDD5 238 aa8.56□□□□□ -1.04
APP-213ENST00000464867 C16orf97H3BN30 126 aa8.56□□□□□ -1.04
APP-213ENST00000464867 HS3ST1O14792 307 aa8.56□□□□□ -1.04
APP-213ENST00000464867 TMPRSS2O15393 492 aa8.56□□□□□ -1.04
APP-213ENST00000464867 PRKNO60260 465 aaPredicted RBP8.56□□□□□ -1.04
APP-213ENST00000464867 DLX3O60479 287 aa8.56□□□□□ -1.04
APP-213ENST00000464867 LMX1BO60663 402 aa8.56□□□□□ -1.04
APP-213ENST00000464867 MATN4O95460 622 aa8.56□□□□□ -1.04
APP-213ENST00000464867 SYF2O95926 243 aaKnown RBP8.56□□□□□ -1.04
APP-213ENST00000464867 GAS8O95995 478 aa8.56□□□□□ -1.04
APP-213ENST00000464867 GOT2P00505 430 aaKnown RBP8.56□□□□□ -1.04
APP-213ENST00000464867 GCKP35557 465 aa8.56□□□□□ -1.04
APP-213ENST00000464867 CD79BP40259 229 aa8.56□□□□□ -1.04
APP-213ENST00000464867 KCNJ5P48544 419 aa8.56□□□□□ -1.04
APP-213ENST00000464867 HK2P52789 917 aa8.56□□□□□ -1.04
APP-213ENST00000464867 EIF3BP55884 814 aaKnown RBP8.56□□□□□ -1.04
APP-213ENST00000464867 TOMM20Q15388 145 aa8.56□□□□□ -1.04
APP-213ENST00000464867 PDCD2Q16342 344 aaPredicted RBP8.56□□□□□ -1.04
APP-213ENST00000464867 BBS9Q3SYG4 887 aa8.56□□□□□ -1.04
APP-213ENST00000464867 VASNQ6EMK4 673 aa8.56□□□□□ -1.04
APP-213ENST00000464867 LDB1Q86U70 411 aaPredicted RBP8.56□□□□□ -1.04
APP-213ENST00000464867 CCDC50Q8IVM0 306 aa8.56□□□□□ -1.04
APP-213ENST00000464867 RFLNBQ8N5W9 214 aa8.56□□□□□ -1.04
APP-213ENST00000464867 OR4L1Q8NH43 312 aa8.56□□□□□ -1.04
APP-213ENST00000464867 ZPLD1Q8TCW7 415 aa8.56□□□□□ -1.04
APP-213ENST00000464867 SREK1Q8WXA9 508 aaKnown RBP8.56□□□□□ -1.04
APP-213ENST00000464867 CTNNBL1Q8WYA6 563 aaPredicted RBP8.56□□□□□ -1.04
APP-213ENST00000464867 DAZLQ92904 295 aaKnown RBP8.56□□□□□ -1.04
APP-213ENST00000464867 HAUS1Q96CS2 278 aa8.56□□□□□ -1.04
APP-213ENST00000464867 LCORQ96JN0 433 aaPredicted RBP8.56□□□□□ -1.04
APP-213ENST00000464867 KRT12Q99456 494 aa8.56□□□□□ -1.04
APP-213ENST00000464867 PKP4Q99569 1192 aa8.56□□□□□ -1.04
APP-213ENST00000464867 ELOVL5Q9NYP7 299 aa8.56□□□□□ -1.04
APP-213ENST00000464867 CNIH4Q9P003 139 aa8.56□□□□□ -1.04
APP-213ENST00000464867 MROH6A6NGR9 719 aa8.55□□□□□ -1.04
APP-213ENST00000464867 LRRC10BA6NIK2 292 aa8.55□□□□□ -1.04
APP-213ENST00000464867 E7ENX8 843 aa8.55□□□□□ -1.04
APP-213ENST00000464867 NDUFS4O43181 175 aa8.55□□□□□ -1.04
APP-213ENST00000464867 CEP104O60308 925 aa8.55□□□□□ -1.04
APP-213ENST00000464867 SLC16A8O95907 504 aa8.55□□□□□ -1.04
APP-213ENST00000464867 SERPIND1P05546 499 aa8.55□□□□□ -1.04
APP-213ENST00000464867 H2AFZP0C0S5 128 aa8.55□□□□□ -1.04
APP-213ENST00000464867 TNNT1P13805 278 aa8.55□□□□□ -1.04
APP-213ENST00000464867 POU2F1P14859 743 aa8.55□□□□□ -1.04
APP-213ENST00000464867 RBL1P28749 1068 aa8.55□□□□□ -1.04
APP-213ENST00000464867 UGT2B10P36537 528 aa8.55□□□□□ -1.04
APP-213ENST00000464867 TTPAP49638 278 aa8.55□□□□□ -1.04
APP-213ENST00000464867 PRAMEP78395 509 aa8.55□□□□□ -1.04
APP-213ENST00000464867 VLDLRP98155 873 aa8.55□□□□□ -1.04
APP-213ENST00000464867 SLC13A2Q13183 592 aa8.55□□□□□ -1.04
APP-213ENST00000464867 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.55□□□□□ -1.04
APP-213ENST00000464867 CCDC181Q5TID7 509 aa8.55□□□□□ -1.04
APP-213ENST00000464867 PRAMEF20Q5VT98 475 aa8.55□□□□□ -1.04
APP-213ENST00000464867 LRRC38Q5VT99 294 aa8.55□□□□□ -1.04
APP-213ENST00000464867 ALKBH5Q6P6C2 394 aaKnown RBP8.55□□□□□ -1.04
APP-213ENST00000464867 MFSD7Q6UXD7 560 aa8.55□□□□□ -1.04
APP-213ENST00000464867 H2AFVQ71UI9 128 aa8.55□□□□□ -1.04
APP-213ENST00000464867 AFAP1L2Q8N4X5 818 aa8.55□□□□□ -1.04
APP-213ENST00000464867 TBC1D19Q8N5T2 526 aa8.55□□□□□ -1.04
APP-213ENST00000464867 ZNF740Q8NDX6 193 aa8.55□□□□□ -1.04
APP-213ENST00000464867 ZNF480Q8WV37 535 aa8.55□□□□□ -1.04
APP-213ENST00000464867 ABTB1Q969K4 478 aaPredicted RBP8.55□□□□□ -1.04
APP-213ENST00000464867 REPS1Q96D71 796 aa8.55□□□□□ -1.04
APP-213ENST00000464867 WDYHV1Q96HA8 205 aa8.55□□□□□ -1.04
APP-213ENST00000464867 DOHHQ9BU89 302 aa8.55□□□□□ -1.04
APP-213ENST00000464867 PCBD2Q9H0N5 130 aa8.55□□□□□ -1.04
APP-213ENST00000464867 ADAP2Q9NPF8 381 aa8.55□□□□□ -1.04
APP-213ENST00000464867 HOMER3Q9NSC5 361 aa8.55□□□□□ -1.04
APP-213ENST00000464867 KCNS2Q9ULS6 477 aa8.55□□□□□ -1.04
APP-213ENST00000464867 ZNF148Q9UQR1 794 aa8.55□□□□□ -1.04
APP-213ENST00000464867 R3HDM2Q9Y2K5 976 aaKnown RBP8.55□□□□□ -1.04
APP-213ENST00000464867 RNF114Q9Y508 228 aa8.55□□□□□ -1.04
APP-213ENST00000464867 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.54□□□□□ -1.04
APP-213ENST00000464867 URADA6NGE7 173 aa8.54□□□□□ -1.04
APP-213ENST00000464867 ACSL3O95573 720 aa8.54□□□□□ -1.04
APP-213ENST00000464867 C1QAP02745 245 aa8.54□□□□□ -1.04
APP-213ENST00000464867 IFNA16P05015 189 aa8.54□□□□□ -1.04
APP-213ENST00000464867 GSTP1P09211 210 aaKnown RBP8.54□□□□□ -1.04
APP-213ENST00000464867 PSMA3P25788 255 aa8.54□□□□□ -1.04
APP-213ENST00000464867 ATP5DP30049 168 aa8.54□□□□□ -1.04
APP-213ENST00000464867 COILP38432 576 aaPredicted RBP8.54□□□□□ -1.04
APP-213ENST00000464867 CDKN2BP42772 138 aa8.54□□□□□ -1.04
APP-213ENST00000464867 RGS1Q08116 209 aa8.54□□□□□ -1.04
APP-213ENST00000464867 PWP1Q13610 501 aa8.54□□□□□ -1.04
APP-213ENST00000464867 ELAVL1Q15717 326 aaKnown RBP8.54□□□□□ -1.04
APP-213ENST00000464867 NHSL2Q5HYW2 709 aa8.54□□□□□ -1.04
APP-213ENST00000464867 FAM120AOSQ5T036 256 aa8.54□□□□□ -1.04
APP-213ENST00000464867 E4F1Q66K89 784 aaPredicted RBP8.54□□□□□ -1.04
APP-213ENST00000464867 ABHD17CQ6PCB6 329 aa8.54□□□□□ -1.04
APP-213ENST00000464867 CBLL1Q75N03 491 aa8.54□□□□□ -1.04
APP-213ENST00000464867 ZNF550Q7Z398 422 aa8.54□□□□□ -1.04
APP-213ENST00000464867 LRRC6Q86X45 466 aa8.54□□□□□ -1.04
APP-213ENST00000464867 DND1Q8IYX4 353 aaKnown RBP8.54□□□□□ -1.04
APP-213ENST00000464867 GCNT2Q8N0V5 402 aa8.54□□□□□ -1.04
APP-213ENST00000464867 ARIH2OSQ8N7S6 290 aa8.54□□□□□ -1.04
APP-213ENST00000464867 TC2NQ8N9U0 490 aa8.54□□□□□ -1.04
APP-213ENST00000464867 MFSD9Q8NBP5 474 aa8.54□□□□□ -1.04
APP-213ENST00000464867 MORN4Q8NDC4 146 aa8.54□□□□□ -1.04
APP-213ENST00000464867 OR8K3Q8NH51 312 aa8.54□□□□□ -1.04
APP-213ENST00000464867 STK35Q8TDR2 534 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms