RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 TEDDM1Q5T9Z0 273 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 SHEQ5VZ18 495 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 FAM45BPQ6NSW5 357 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 LYPD8Q6UX82 237 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 PRIMA1Q86XR5 153 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 DND1Q8IYX4 353 aaKnown RBP9.98□□□□□ -0.81
CBX3-205ENST00000462165 KRT78Q8N1N4 520 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 LIX1Q8N485 282 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 SLC15A4Q8N697 577 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 C7orf57Q8NEG2 295 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 SLC22A8Q8TCC7 542 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 FAM45AQ8TCE6 357 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 ANKRD7Q92527 254 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 KIAA1191Q96A73 305 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 CERS2Q96G23 380 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 CAPZA3Q96KX2 299 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 EGFL8Q99944 293 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 SLC6A15Q9H2J7 730 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 COPS7BQ9H9Q2 264 aaPredicted RBP9.98□□□□□ -0.81
CBX3-205ENST00000462165 PRDM7Q9NQW5 492 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 BEX4Q9NWD9 120 aaPredicted RBP9.98□□□□□ -0.81
CBX3-205ENST00000462165 COPS7AQ9UBW8 275 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 OARD1Q9Y530 152 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 ZANQ9Y493 2812 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 FBN1P35555 2871 aaKnown RBP9.98□□□□□ -0.81
CBX3-205ENST00000462165 JMJD1CQ15652 2540 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 CLCA1A8K7I4 914 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 CDC7O00311 574 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 ZNF37AP17032 561 aaPredicted RBP9.97□□□□□ -0.81
CBX3-205ENST00000462165 CXCR5P32302 372 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 SLC6A12P48065 614 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 TRPC1P48995 793 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 NKX6-1P78426 367 aaPredicted RBP9.97□□□□□ -0.81
CBX3-205ENST00000462165 IGLV3-21P80748 117 aaPredicted RBP9.97□□□□□ -0.81
CBX3-205ENST00000462165 CRYZQ08257 329 aaKnown RBP9.97□□□□□ -0.81
CBX3-205ENST00000462165 DUSP8Q13202 625 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 PRAMEF20Q5VT98 475 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 VN1R5Q7Z5H4 357 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 C9orf40Q8IXQ3 194 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 PPIL6Q8IXY8 311 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 LINC01560Q8TB33 94 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 MAGOHBQ96A72 148 aaKnown RBP9.97□□□□□ -0.81
CBX3-205ENST00000462165 ANKRD9Q96BM1 317 aaPredicted RBP9.97□□□□□ -0.81
CBX3-205ENST00000462165 SPACA9Q96E40 222 aaPredicted RBP9.97□□□□□ -0.81
CBX3-205ENST00000462165 SENP5Q96HI0 755 aaPredicted RBP9.97□□□□□ -0.81
CBX3-205ENST00000462165 RUNDC3BQ96NL0 473 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 MDFIQ99750 246 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 CAPS2Q9BXY5 557 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 PRDM14Q9GZV8 571 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 ZNF395Q9H8N7 513 aaPredicted RBP9.97□□□□□ -0.81
CBX3-205ENST00000462165 LYRM4Q9HD34 91 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 CNIH4Q9P003 139 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 JKAMPQ9P055 326 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 SLC17A6Q9P2U8 582 aa9.97□□□□□ -0.81
CBX3-205ENST00000462165 EXPH5Q8NEV8 1989 aa9.96□□□□□ -0.81
CBX3-205ENST00000462165 C15orf38-AP3S2A0A0A6YYH1 394 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 A0A1W2PPR1 153 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 NPEPPSL1A6NEC2 478 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 LY6G6DO95868 133 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 C1QAP02745 245 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 HRGP04196 525 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 IGKV3-11P04433 115 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 GDF5P43026 501 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 KCNC1P48547 511 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 WNT3P56703 355 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 TGM3Q08188 693 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 PCBP2Q15366 365 aaKnown RBP eCLIP9.96□□□□□ -0.82
CBX3-205ENST00000462165 SF3B4Q15427 424 aaKnown RBP eCLIP9.96□□□□□ -0.82
CBX3-205ENST00000462165 CYP1B1Q16678 543 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 C18orf21Q32NC0 220 aaPredicted RBP9.96□□□□□ -0.82
CBX3-205ENST00000462165 RNASEH2BQ5TBB1 312 aaKnown RBP9.96□□□□□ -0.82
CBX3-205ENST00000462165 NSUN5P2Q63ZY6 315 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 ADNP2Q6IQ32 1131 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 CCDC137Q6PK04 289 aaKnown RBP9.96□□□□□ -0.82
CBX3-205ENST00000462165 ZNF793Q6ZN11 406 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 ZNF662Q6ZS27 426 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 PM20D2Q8IYS1 436 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 RASGEF1CQ8N431 466 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 NKAPQ8N5F7 415 aaKnown RBP9.96□□□□□ -0.82
CBX3-205ENST00000462165 TRIM58Q8NG06 486 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 OR10G3Q8NGC4 313 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 NUDT8Q8WV74 236 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 RHBDF1Q96CC6 855 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 HSPBAP1Q96EW2 488 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 COX4I2Q96KJ9 171 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 KCNC2Q96PR1 638 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 TIMP4Q99727 224 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 MAPKAP1Q9BPZ7 522 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 NAT9Q9BTE0 207 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 ROGDIQ9GZN7 287 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 EPB41L4BQ9H329 900 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 EHD1Q9H4M9 534 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 GPRC5BQ9NZH0 403 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 CNOT11Q9UKZ1 510 aaKnown RBP9.96□□□□□ -0.82
CBX3-205ENST00000462165 ZNF490Q9ULM2 529 aaPredicted RBP9.96□□□□□ -0.82
CBX3-205ENST00000462165 CHCHD2Q9Y6H1 151 aaPredicted RBP9.96□□□□□ -0.82
CBX3-205ENST00000462165 IKBKGQ9Y6K9 419 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 RTTNQ86VV8 2226 aa9.96□□□□□ -0.82
CBX3-205ENST00000462165 ANKRD33BA6NCL7 494 aa9.95□□□□□ -0.82
CBX3-205ENST00000462165 MBD3L4A6NDZ8 208 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms