RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 QPCTQ16769 361 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 MIB1Q86YT6 1006 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ASB17Q8WXJ9 295 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SMPDL3AQ92484 453 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 HOXB13Q92826 284 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 CMSS1Q9BQ75 279 aaKnown RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ANKRD19PQ9H560 264 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 Q9N2J8 555 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ACP6Q9NPH0 428 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 IKZF2Q9UKS7 526 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PCDHAC2Q9Y5I4 1007 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF462Q96JM2 2506 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 DLDP09622 509 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TAP2Q03519 686 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SCAPQ12770 1279 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 MSMO1Q15800 293 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PPP2R2DQ66LE6 453 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 C6orf89Q6UWU4 347 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 MRPL10Q7Z7H8 261 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 LGI4Q8N135 537 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ZSCAN1Q8NBB4 408 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 P2RY11Q96G91 374 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 KCNC2Q96PR1 638 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PIP5K1AQ99755 562 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CHRAC1Q9NRG0 131 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CAMTA1Q9Y6Y1 1673 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 F5H0A9 414 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CLIC1O00299 241 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 INSIG1O15503 277 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SORDQ00796 357 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PLEKHH3Q7Z736 793 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 GTPBP8Q8N3Z3 284 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 C12orf45Q8N5I9 185 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 LAMP5Q9UJQ1 280 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CEPT1Q9Y6K0 416 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TLN1Q9Y490 2541 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 LRP6O75581 1613 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ANKRD28O15084 1053 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TAS2R19P59542 299 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SNTB2Q13425 540 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 RBMS2Q15434 407 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 GLYATL1Q969I3 302 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SGTBQ96EQ0 304 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SPACA7Q96KW9 195 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 AMDHD1Q96NU7 426 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TRAF4Q9BUZ4 470 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PADI2Q9Y2J8 665 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 C2CD3Q4AC94 2353 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ELOA3DA6NLF2 546 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 GMDSO60547 372 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF780AO75290 641 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF821O75541 412 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PNMTP11086 282 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 DRD2P14416 443 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 RHBDL3P58872 404 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 BMPR2Q13873 1038 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 DUSP6Q16828 381 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ELOA3BQ3SY89 546 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PSMG4Q5JS54 123 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 GPR139Q6DWJ6 353 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PAPD4Q6PIY7 484 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 FAM122BQ7Z309 247 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SERINC5Q86VE9 423 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ELOA3Q8NG57 546 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SSX3Q99909 188 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SNRNP25Q9BV90 132 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 PCED1AQ9H1Q7 454 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 MVB12BQ9H7P6 319 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 EDARQ9UNE0 448 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 POMT1Q9Y6A1 747 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CNTNAP1P78357 1384 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ABCA3Q99758 1704 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 GAPDHSO14556 408 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TP53I11O14683 189 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ICAM3P32942 547 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 HK3P52790 923 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 MLLT10P55197 1068 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ACTR1AP61163 376 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TUSC3Q13454 348 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 RAB35Q15286 201 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 C3orf38Q5JPI3 329 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CCBE1Q6UXH8 406 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 USP51Q70EK9 711 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SIAH1Q8IUQ4 282 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM139Q8IV31 216 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF433Q8N7K0 673 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ZDHHC6Q9H6R6 413 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SNTG1Q9NSN8 517 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 FBXL4Q9UKA2 621 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 SLC6A14Q9UN76 642 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 HIF3AQ9Y2N7 669 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 BHLHE40O14503 412 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 LRCH4O75427 683 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 CREB1P16220 341 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 GP2P55259 537 aaKnown RBP5.02□□□□□ -1.61
CSMD3-204ENST00000455883 BTG1P62324 171 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TLE4Q04727 773 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 OR8S1Q8NH09 359 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 ELP4Q96EB1 424 aa5.02□□□□□ -1.61
CSMD3-204ENST00000455883 TXNDC15Q96J42 360 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms