RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 MRPL1Q9BYD6 325 aaKnown RBP13.74□□□□□ -0.21
VPS16-205ENST00000453689 EPN3Q9H201 632 aa13.74□□□□□ -0.21
VPS16-205ENST00000453689 LYRM4Q9HD34 91 aa13.74□□□□□ -0.21
VPS16-205ENST00000453689 KCMF1Q9P0J7 381 aa13.74□□□□□ -0.21
VPS16-205ENST00000453689 MMACHCQ9Y4U1 282 aa13.74□□□□□ -0.21
VPS16-205ENST00000453689 CCL27Q9Y4X3 112 aa13.74□□□□□ -0.21
VPS16-205ENST00000453689 TCRBV16S1A1N1A0A5B0 115 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 CYR61O00622 381 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 EDF1O60869 148 aaKnown RBP13.73□□□□□ -0.21
VPS16-205ENST00000453689 JUNP05412 331 aaKnown RBP13.73□□□□□ -0.21
VPS16-205ENST00000453689 ACTN3Q08043 901 aaPredicted RBP13.73□□□□□ -0.21
VPS16-205ENST00000453689 BTBD16Q32M84 506 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 SPIN4Q56A73 249 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 SPDYAQ5MJ70 313 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 SLC6A19Q695T7 634 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 PLAG1Q6DJT9 500 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 JMJD6Q6NYC1 403 aaPredicted RBP13.73□□□□□ -0.21
VPS16-205ENST00000453689 IGFL2Q6UWQ7 119 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 Q6ZSR9 355 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 COMMD6Q7Z4G1 85 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 WDR75Q8IWA0 830 aaKnown RBP13.73□□□□□ -0.21
VPS16-205ENST00000453689 SCUBE1Q8IWY4 988 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 ZCCHC7Q8N3Z6 543 aaKnown RBP13.73□□□□□ -0.21
VPS16-205ENST00000453689 SIRT6Q8N6T7 355 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 OR2T11Q8NH01 316 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 APIPQ96GX9 242 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 METTL2AQ96IZ6 378 aaKnown RBP13.73□□□□□ -0.21
VPS16-205ENST00000453689 LPAR4Q99677 370 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 MAPKAP1Q9BPZ7 522 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 ZNF717Q9BY31 904 aaPredicted RBP13.73□□□□□ -0.21
VPS16-205ENST00000453689 NUF2Q9BZD4 464 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 TRIM4Q9C037 500 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 PRTFDC1Q9NRG1 225 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 PTGFRNQ9P2B2 879 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 ADAM29Q9UKF5 820 aa13.73□□□□□ -0.21
VPS16-205ENST00000453689 MRPS33Q9Y291 106 aaKnown RBP13.73□□□□□ -0.21
VPS16-205ENST00000453689 EML6Q6ZMW3 1958 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 SPTA1P02549 2419 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 TRPC5OSA6NMA1 111 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 TGFBR3LH3BV60 316 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 LSM1O15116 133 aaKnown RBP13.72□□□□□ -0.21
VPS16-205ENST00000453689 BSGP35613 385 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 SOX11P35716 441 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 HSD17B7P56937 341 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 AP2B1P63010 937 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 TLE1Q04724 770 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 ACSM2AQ08AH3 577 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 SLC13A2Q13183 592 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 EXT1Q16394 746 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 CRB2Q5IJ48 1285 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 ACSM2BQ68CK6 577 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 ISLR2Q6UXK2 745 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 ZNF595Q8IYB9 648 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 ZADH2Q8N4Q0 377 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 C1orf52Q8N6N3 182 aaKnown RBP13.72□□□□□ -0.21
VPS16-205ENST00000453689 Q8NA96 180 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 CHTF18Q8WVB6 975 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 TM9SF4Q92544 642 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 PPP3R2Q96LZ3 170 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 C3orf30Q96M34 536 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 DDX31Q9H8H2 851 aaKnown RBP13.72□□□□□ -0.21
VPS16-205ENST00000453689 MEAF6Q9HAF1 191 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 LRTM1Q9HBL6 345 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 C1orf109Q9NX04 203 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 SIRT5Q9NXA8 310 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 LUZP4Q9P127 313 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 CLDN16Q9Y5I7 305 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 CSAG2Q9Y5P2 127 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 USH1CQ9Y6N9 552 aa13.72□□□□□ -0.21
VPS16-205ENST00000453689 A0A0A6YYD5 115 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 ARHGAP10A1A4S6 786 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 PYCARD-AS1I3L0S3 204 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 J3QKU1 62 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 CLDN4O14493 209 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 POLR3GO15318 223 aaPredicted RBP13.71□□□□□ -0.21
VPS16-205ENST00000453689 EEDO75530 441 aaKnown RBP13.71□□□□□ -0.21
VPS16-205ENST00000453689 SORBS2O94875 1100 aaKnown RBP13.71□□□□□ -0.21
VPS16-205ENST00000453689 VIMP08670 466 aaKnown RBP13.71□□□□□ -0.21
VPS16-205ENST00000453689 GYS2P54840 703 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 SLC26A5P58743 744 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 SLAMF1Q13291 335 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 MFAP5Q13361 173 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 B3GNTL1Q67FW5 361 aaPredicted RBP13.71□□□□□ -0.21
VPS16-205ENST00000453689 GALNT18Q6P9A2 607 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 CYP20A1Q6UW02 462 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 LINC00696Q6ZRV3 163 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 M1APQ8TC57 530 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 PNPLA2Q96AD5 504 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 TUBGCP3Q96CW5 907 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 C11orf24Q96F05 449 aaPredicted RBP13.71□□□□□ -0.21
VPS16-205ENST00000453689 PPP1R36Q96LQ0 422 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 LMF1Q96S06 567 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 EPS8L2Q9H6S3 715 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 LYARQ9NX58 379 aaKnown RBP13.71□□□□□ -0.21
VPS16-205ENST00000453689 MCM8Q9UJA3 840 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 FBXW2Q9UKT8 454 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 B3GNT3Q9Y2A9 372 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 TMED5Q9Y3A6 229 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 ZNF462Q96JM2 2506 aa13.71□□□□□ -0.21
VPS16-205ENST00000453689 ATP6AP2A0A1C7CYW4 349 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms