RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 PUM1Q14671 1186 aaKnown RBP eCLIP13.22□□□□□ -0.29
SHMT2-203ENST00000449049 MRPL14Q6P1L8 145 aaKnown RBP13.22□□□□□ -0.29
SHMT2-203ENST00000449049 C6orf15Q6UXA7 325 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-203ENST00000449049 SCUBE1Q8IWY4 988 aa13.22□□□□□ -0.29
SHMT2-203ENST00000449049 KLHL29Q96CT2 875 aa13.22□□□□□ -0.29
SHMT2-203ENST00000449049 NSL1Q96IY1 281 aa13.22□□□□□ -0.29
SHMT2-203ENST00000449049 ZNF681Q96N22 645 aa13.22□□□□□ -0.29
SHMT2-203ENST00000449049 OR52E6Q96RD3 313 aa13.22□□□□□ -0.29
SHMT2-203ENST00000449049 YIPF2Q9BWQ6 316 aa13.22□□□□□ -0.29
SHMT2-203ENST00000449049 NRSN2Q9GZP1 204 aa13.22□□□□□ -0.29
SHMT2-203ENST00000449049 AKIRIN1Q9H9L7 192 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-203ENST00000449049 C14orf105Q9NVL8 296 aa13.22□□□□□ -0.29
SHMT2-203ENST00000449049 IFT80Q9P2H3 777 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-203ENST00000449049 PSME2Q9UL46 239 aa13.22□□□□□ -0.29
SHMT2-203ENST00000449049 NDUFAF1Q9Y375 327 aa13.22□□□□□ -0.29
SHMT2-203ENST00000449049 RIF1Q5UIP0 2472 aaKnown RBP13.21□□□□□ -0.29
SHMT2-203ENST00000449049 TEX51A0A1B0GUA7 166 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 VSTM2BA6NLU5 285 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 CDRT15L2A8MXV6 281 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 RNASET2O00584 256 aaKnown RBP13.21□□□□□ -0.29
SHMT2-203ENST00000449049 ANGPT2O15123 496 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 FGF17O60258 216 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 CTNSO60931 367 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 JRKO75564 520 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 CALB2P22676 271 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 MNAT1P51948 309 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 ERV3-1Q14264 604 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 VWA2Q5GFL6 755 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 ANXA8L1Q5VT79 327 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 FBXW10Q5XX13 1052 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 REP15Q6BDI9 236 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 FAM198BQ6UWH4 519 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 TIPARPQ7Z3E1 657 aaKnown RBP13.21□□□□□ -0.29
SHMT2-203ENST00000449049 RETREG3Q86VR2 466 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 OR4K14Q8NGD5 310 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 CIDECQ96AQ7 238 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-203ENST00000449049 ANKRD9Q96BM1 317 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-203ENST00000449049 CNRIP1Q96F85 164 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-203ENST00000449049 TUBB6Q9BUF5 446 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 PRTFDC1Q9NRG1 225 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 LEF1Q9UJU2 399 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-203ENST00000449049 MMACHCQ9Y4U1 282 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 CLDN16Q9Y5I7 305 aa13.21□□□□□ -0.29
SHMT2-203ENST00000449049 MYO1GB0I1T2 1018 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 CLDN4O14493 209 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 PDPK1O15530 556 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 B4GALT2O60909 372 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 ERAL1O75616 437 aaKnown RBP13.21□□□□□ -0.3
SHMT2-203ENST00000449049 CDC123O75794 336 aaPredicted RBP13.21□□□□□ -0.3
SHMT2-203ENST00000449049 DXOO77932 396 aaKnown RBP13.21□□□□□ -0.3
SHMT2-203ENST00000449049 GPR75O95800 540 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 IGLV3-21P80748 117 aaPredicted RBP13.21□□□□□ -0.3
SHMT2-203ENST00000449049 FOLH1Q04609 750 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 OCA2Q04671 838 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 LRRC74AQ0VAA2 488 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 BNIP1Q12981 228 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 NKG7Q16617 165 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 QSOX2Q6ZRP7 698 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 SAMD14Q8IZD0 417 aaPredicted RBP13.21□□□□□ -0.3
SHMT2-203ENST00000449049 STT3BQ8TCJ2 826 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 MR1Q95460 341 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 CHST8Q9H2A9 424 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 RMND5AQ9H871 391 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 WDR54Q9H977 334 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 SLAMF7Q9NQ25 335 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 SERHLQ9NQF3 203 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 ACSS1Q9NUB1 689 aaPredicted RBP13.21□□□□□ -0.3
SHMT2-203ENST00000449049 BTNL2Q9UIR0 455 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 ENTPD4Q9Y227 616 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 MAN2B2Q9Y2E5 1009 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 ZNF780BQ9Y6R6 833 aa13.21□□□□□ -0.3
SHMT2-203ENST00000449049 PRSS51A0A1B0GVH4 220 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 LDB3O75112 727 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 CNOT3O75175 753 aaKnown RBP13.2□□□□□ -0.3
SHMT2-203ENST00000449049 ZGLP1P0C6A0 271 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 ESRRAP11474 423 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-203ENST00000449049 CD82P27701 267 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 RBMS1P29558 406 aaKnown RBP13.2□□□□□ -0.3
SHMT2-203ENST00000449049 SLC5A2P31639 672 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 RHAGQ02094 409 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 RTP5Q14D33 572 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 MLC1Q15049 377 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 MAPKAPK3Q16644 382 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 PAGE3Q5JUK9 113 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 FAM180BQ6P0A1 224 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 FAM199XQ6PEV8 388 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-203ENST00000449049 SLC2A7Q6PXP3 512 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 DPP10Q8N608 796 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 VPS37AQ8NEZ2 397 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 GTF2H4Q92759 462 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 RCN3Q96D15 328 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 CCDC115Q96NT0 180 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 CXorf56Q9H5V9 222 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 ASCL3Q9NQ33 180 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 GIMAP4Q9NUV9 329 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 PADI1Q9ULC6 663 aa13.2□□□□□ -0.3
SHMT2-203ENST00000449049 A0A1W2PS29 197 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 TGFBR3LH3BV60 316 aa13.19□□□□□ -0.3
SHMT2-203ENST00000449049 CCNYL3P0C7X3 344 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms