RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CFIP05156 583 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 CAPZBP47756 277 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 LSSP48449 732 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 BMXP51813 675 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ARFIP1P53367 373 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 PHC1P78364 1004 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 TGM3Q08188 693 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 DUSP7Q16829 419 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 TRIM16LQ309B1 348 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 TOR1AIP1Q5JTV8 583 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 FCRL6Q6DN72 434 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 OR4C11Q6IEV9 310 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 TRIM40Q6P9F5 258 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 DLEU7Q6UYE1 221 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ZNF438Q7Z4V0 828 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 VN1R4Q7Z5H5 301 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 RABEPKQ7Z6M1 372 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 OR2L5Q8NG80 312 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 JADE3Q92613 823 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 TANKQ92844 425 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 MS4A6EQ96DS6 147 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 FCRL4Q96PJ5 515 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 OR2A5Q96R48 311 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 COQ7Q99807 217 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 MACROD1Q9BQ69 325 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 KCNH6Q9H252 994 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 SP140LQ9H930 580 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 LIN7BQ9HAP6 207 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ATP13A2Q9NQ11 1180 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 EVA1BQ9NVM1 165 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 SH3BP4Q9P0V3 963 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ABCD2Q9UBJ2 740 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 PCDHGB4Q9UN71 923 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 PCDHGB5Q9Y5G0 923 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 FANCMQ8IYD8 2048 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 PRORSD1PA6NEY8 169 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ATP6V1B1P15313 513 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 TCN1P20061 433 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 TGM1P22735 817 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 EPHA8P29322 1005 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 PTGS2P35354 604 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 AP2S1P53680 142 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 PPP1CAP62136 330 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 SHBQ15464 509 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 DUOXA1Q1HG43 343 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ZNF528Q3MIS6 628 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 PEAR1Q5VY43 1037 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 FAM71E1Q6IPT2 247 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 BMP8AQ7Z5Y6 402 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 CAMKMTQ7Z624 323 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 UBE3DQ7Z6J8 389 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 KIAA2013Q8IYS2 634 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 GALNT4Q8N4A0 578 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 INTS12Q96CB8 462 aaKnown RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 MTERF3Q96E29 417 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 KCNC2Q96PR1 638 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 DUSP26Q9BV47 211 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 SLC6A16Q9GZN6 736 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ABCG4Q9H172 646 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 SEMA6CQ9H3T2 930 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 DDX31Q9H8H2 851 aaKnown RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 NANOGQ9H9S0 305 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 LHX9Q9NQ69 397 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 MIEF1Q9NQG6 463 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 STMN3Q9NZ72 180 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 LRIT1Q9P2V4 623 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 BCAP29Q9UHQ4 241 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ATP6V1HQ9UI12 483 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 PILRAQ9UKJ1 303 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 MAN2B2Q9Y2E5 1009 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 EML5Q05BV3 1969 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 A0A0G2JN53 185 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 A0A1B0GTQ1 180 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 NME4O00746 187 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 RFXANKO14593 260 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 NUDT21O43809 227 aaKnown RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 DFNA5O60443 496 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 IL3P08700 152 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 LAMP1P11279 417 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 AVPR2P30518 371 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 EVI2BP34910 448 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 GSTM5P46439 218 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 EPHA4P54764 986 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 HYAL2Q12891 473 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 HEPACAMQ14CZ8 416 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 SPATS1Q496A3 300 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 RABL3Q5HYI8 236 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ANXA8L1Q5VT79 327 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ANKRD26P1Q6NSI1 321 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ABHD17CQ6PCB6 329 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ANKRD46Q86W74 232 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 SLC35F3Q8IY50 421 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 CAMKVQ8NCB2 501 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 ZBTB44Q8NCP5 570 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 CEP76Q8TAP6 659 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 RERGQ96A58 199 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-201ENST00000442201 TMEM125Q96AQ2 219 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 PPCDCQ96CD2 204 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 COQ8BQ96D53 544 aa7.67□□□□□ -1.18
CCDC39-201ENST00000442201 TBCDQ9BTW9 1192 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms