RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 SP140Q13342 867 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 FAM46DQ8NEK8 389 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 CHAC2Q8WUX2 184 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 RNF167Q9H6Y7 350 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 CAPN10Q9HC96 672 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 CCDC177Q9NQR7 707 aaPredicted RBP13.62□□□□□ -0.23
MINDY4-202ENST00000409881 PLSCR3Q9NRY6 295 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 UCKL1Q9NWZ5 548 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 CARD8Q9Y2G2 431 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 ASB1Q9Y576 335 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 GMPPBQ9Y5P6 360 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 ELOVL7A1L3X0 281 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 CLDN24A6NM45 220 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 ARHGEF33A8MVX0 844 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 GFYI3L273 518 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 DSCR3O14972 297 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 ZW10O43264 779 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 PSIP1O75475 530 aaKnown RBP13.62□□□□□ -0.23
MINDY4-202ENST00000409881 PIAS2O75928 621 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 GUCA1CO95843 209 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 CATP04040 527 aaKnown RBP13.62□□□□□ -0.23
MINDY4-202ENST00000409881 CYP2A7P20853 494 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 GADD45AP24522 165 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 EPHA2P29317 976 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 CYP4F3Q08477 520 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 HLA-BQ31612 363 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 SOWAHCQ53LP3 525 aaPredicted RBP13.62□□□□□ -0.23
MINDY4-202ENST00000409881 NXNL2Q5VZ03 156 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 ZCCHC8Q6NZY4 707 aaKnown RBP13.62□□□□□ -0.23
MINDY4-202ENST00000409881 CYP20A1Q6UW02 462 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 GKN2Q86XP6 184 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 OR5AR1Q8NGP9 310 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 DEPDC7Q96QD5 511 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 TMEM246Q9BRR3 403 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 SLC12A9Q9BXP2 914 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 NUSAP1Q9BXS6 441 aaKnown RBP13.62□□□□□ -0.23
MINDY4-202ENST00000409881 CD274Q9NZQ7 290 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 GMEB2Q9UKD1 530 aa13.62□□□□□ -0.23
MINDY4-202ENST00000409881 POLR3HQ9Y535 204 aaPredicted RBP13.62□□□□□ -0.23
MINDY4-202ENST00000409881 SLC16A5O15375 505 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 ALX3O95076 343 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 HIST1H2AGP0C0S8 130 aaPredicted RBP13.61□□□□□ -0.23
MINDY4-202ENST00000409881 F3P13726 295 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 HIST1H2ADP20671 130 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 S100A5P33763 92 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 KRT20P35900 424 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 MAPK9P45984 424 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 HTR3AP46098 478 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 HTR6P50406 440 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 CHRNEQ04844 493 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 KRT33BQ14525 404 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 CDK10Q15131 360 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 RPE65Q16518 533 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 RFX4Q33E94 735 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 ZFP69Q49AA0 526 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.61□□□□□ -0.23
MINDY4-202ENST00000409881 TCEAL6Q6IPX3 200 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 SLC23A3Q6PIS1 610 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 UNC5DQ6UXZ4 953 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 MBOAT1Q6ZNC8 495 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 HIPK1Q86Z02 1210 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 OR8J3Q8NGG0 315 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 ATOH1Q92858 354 aaPredicted RBP13.61□□□□□ -0.23
MINDY4-202ENST00000409881 TCEAL3Q969E4 200 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 SLC38A4Q969I6 547 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 HIST1H2AHQ96KK5 128 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 HIST1H2AJQ99878 128 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 EGFL8Q99944 293 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 H2AFJQ9BTM1 129 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 C14orf119Q9NWQ9 140 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 PCTPQ9UKL6 214 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 OARD1Q9Y530 152 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 PCDHGA5Q9Y5G8 931 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 GPR179Q6PRD1 2367 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 B4DGG1 531 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 C1orf105O95561 183 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 SERPINA1P01009 418 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 RPIAP49247 311 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 DAPP51397 102 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 TUBA1BP68363 451 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 DEFB133Q30KQ1 61 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 CCSMST1Q4G0I0 132 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 ZC3H12BQ5HYM0 836 aaKnown RBP13.61□□□□□ -0.23
MINDY4-202ENST00000409881 ZNF544Q6NX49 715 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 WASH2PQ6VEQ5 465 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 TUBA1AQ71U36 451 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 SFTPA2Q8IWL1 248 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 GALNT12Q8IXK2 581 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 OR52B6Q8NGF0 335 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 OR2I1PQ8NGU4 316 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 PATE1Q8WXA2 126 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 SNX18Q96RF0 628 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 FERD3LQ96RJ6 166 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 CDADC1Q9BWV3 514 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 GTPBP2Q9BX10 602 aaKnown RBP13.61□□□□□ -0.23
MINDY4-202ENST00000409881 ITPAQ9BY32 194 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 GAREM1Q9H706 876 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 IL21RQ9HBE5 538 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 WASH6PQ9NQA3 447 aa13.61□□□□□ -0.23
MINDY4-202ENST00000409881 FAM86C1Q9NVL1 165 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms