RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 COX20Q5RI15 118 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 GLYATQ6IB77 296 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 PRSS42Q7Z5A4 293 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 RNF130Q86XS8 419 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 TMEM52Q8NDY8 209 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 COL26A1Q96A83 441 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 AMDHD1Q96NU7 426 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 TRIM15Q9C019 465 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 LYRM4Q9HD34 91 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 GIMAP4Q9NUV9 329 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 TAS2R7Q9NYW3 318 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 ACTR3BQ9P1U1 418 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 RAPGEFL1Q9UHV5 662 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 SPACA6W5XKT8 324 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 RNF103-CHMP3A0A140T963 221 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 ELOVL7A1L3X0 281 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 PRR33A8MZF0 331 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 FAM220BPB1ANY3 271 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 CHST10O43529 356 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 LDB3O75112 727 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 GMNNO75496 209 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 CDC123O75794 336 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 NELFEP18615 380 aaKnown RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 ALAS2P22557 587 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 FRKP42685 505 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 GZMMP51124 257 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 RPS26P62854 115 aaKnown RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 ABHD18Q0P651 414 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 C16orf72Q14CZ0 275 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 PLA2G2CQ5R387 149 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 TMTC4Q5T4D3 741 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 PTRH1Q86Y79 214 aaKnown RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 MICU2Q8IYU8 434 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 D2HGDHQ8N465 521 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 NATD1Q8N6N6 113 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 OR1L3Q8NH93 324 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 RHBDD1Q8TEB9 315 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 MAL2Q969L2 176 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 MMABQ96EY8 250 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 SLC41A2Q96JW4 573 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 CNDP2Q96KP4 475 aaKnown RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 ZNF768Q9H5H4 540 aaKnown RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 MS4A12Q9NXJ0 267 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 NDOR1Q9UHB4 597 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 PSME2Q9UL46 239 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 MAU2Q9Y6X3 613 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 SPTBP11277 2137 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 GPR179Q6PRD1 2367 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 IGHV5-10-1A0A0J9YXX1 117 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 H3BNX3 289 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 FOXS1O43638 330 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 ETFAP13804 333 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 ANPEPP15144 967 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 GPX2P18283 190 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 GGT1P19440 569 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 CSNK2A2P19784 350 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 UQCRC2P22695 453 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 TP53BP2Q13625 1128 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 GRM7Q14831 915 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 RGNQ15493 299 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 LTB4RQ15722 352 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 AASDHQ4L235 1098 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 CCDC157Q569K6 752 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 PHF19Q5T6S3 580 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 LAIR1Q6GTX8 287 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 OR52E8Q6IFG1 317 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 LCN8Q6JVE9 175 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 TMEM107Q6UX40 140 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 TTLL10Q6ZVT0 673 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 CALHM3Q86XJ0 350 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 CARFQ8N187 725 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 ENDOVQ8N8Q3 282 aaKnown RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 ADCY4Q8NFM4 1077 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 TNIP2Q8NFZ5 429 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 OR4K14Q8NGD5 310 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 OR9A2Q8NGT5 310 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 ZFP28Q8NHY6 868 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 SUN3Q8TAQ9 357 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 FAM110BQ8TC76 370 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 DOK4Q8TEW6 326 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 ZNF764Q96H86 408 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 PEX11GQ96HA9 241 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 REXO5Q96IC2 774 aaKnown RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 CCDC74BQ96LY2 380 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 ZNF285Q96NJ3 590 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 CHRNA10Q9GZZ6 450 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 NEUROD4Q9HD90 331 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 FGF21Q9NSA1 209 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 RXFP3Q9NSD7 469 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 SIRT3Q9NTG7 399 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 ACSS1Q9NUB1 689 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 GPATCH2Q9NW75 528 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 DHCR7Q9UBM7 475 aaKnown RBP11.74□□□□□ -0.53
CHMP3-204ENST00000409727 MAGEL2Q9UJ55 1249 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 AURKCQ9UQB9 309 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 AP3M1Q9Y2T2 418 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 SCN2AQ99250 2005 aa11.74□□□□□ -0.53
CHMP3-204ENST00000409727 CXCR6O00574 342 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 CYR61O00622 381 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 KCNK5O95279 499 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms