RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 LDB3O75112 727 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 GUCY1B2O75343 617 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 ESRRAP11474 423 aaPredicted RBP13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 ECHS1P30084 290 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 GMPRP36959 345 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 CCNG1P51959 295 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 SMSP52788 366 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 RNF4P78317 190 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 PMP22Q01453 160 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 DDX39BQ13838 428 aaKnown RBP13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 GGTA1PQ4G0N0 100 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 OPN5Q6U736 354 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 CYP20A1Q6UW02 462 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 PAGE2Q7Z2X7 111 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 SULF2Q8IWU5 870 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 DND1Q8IYX4 353 aaKnown RBP13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 ST13P4Q8IZP2 240 aaPredicted RBP13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 EIF1ADQ8N9N8 165 aaKnown RBP13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 ZFP62Q8NB50 900 aaPredicted RBP13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 GOLM1Q8NBJ4 401 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 NUBPLQ8TB37 319 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 WDR20Q8TBZ3 569 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 TRPC4APQ8TEL6 797 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 DGAT2Q96PD7 388 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 C1QTNF3Q9BXJ4 246 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 HES7Q9BYE0 225 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 NOL11Q9H8H0 719 aaKnown RBP13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 CHST11Q9NPF2 352 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 HPF1Q9NWY4 346 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 ZNF223Q9UK11 482 aaPredicted RBP13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 ADAM29Q9UKF5 820 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 NPIPA1Q9UND3 350 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 ENTPD4Q9Y227 616 aa13.51□□□□□ -0.25
NIF3L1-205ENST00000409588 EXOC1LA0A1B0GW35 172 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 TMEM200CA6NKL6 621 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 RTCAO00442 366 aaKnown RBP13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 PRRG2O14669 202 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 OR2J2O76002 312 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 GPR75O95800 540 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 OTCP00480 354 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 RPS13P62277 151 aaKnown RBP13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 PLIN5Q00G26 463 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 TNFRSF17Q02223 184 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 FRG2Q64ET8 278 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 MRM1Q6IN84 353 aaKnown RBP13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 NUDT13Q86X67 352 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 PLD6Q8N2A8 252 aaKnown RBP13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 PTGR2Q8N8N7 351 aaPredicted RBP13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 SLC2A12Q8TD20 617 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 DCAKDQ8WVC6 231 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 PHF21BQ96EK2 531 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 SENP5Q96HI0 755 aaPredicted RBP13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 SCYL1Q96KG9 808 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 FRG2BQ96QU4 278 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 OR8D2Q9GZM6 311 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 RNF11Q9Y3C5 154 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 ASB4Q9Y574 426 aa13.5□□□□□ -0.25
NIF3L1-205ENST00000409588 IQANK1A0A1B0GTG1 560 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 TRIM49D1C9J1S8 452 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 SAP18O00422 153 aaKnown RBP13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 OR7A17O14581 309 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 HNRNPRO43390 633 aaKnown RBP13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 SIX3O95343 332 aaPredicted RBP13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 FAM58BPP0C7Q3 252 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 SLC35E2P0CK97 266 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 ALOX15P16050 662 aaPredicted RBP13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 TAC1P20366 129 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 CNR1P21554 472 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 BSGP35613 385 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 DCTP40126 519 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 MEOX1P50221 254 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 IFT88Q13099 833 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 NDUFAF5Q5TEU4 345 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 SP5Q6BEB4 398 aaPredicted RBP13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 TTC19Q6DKK2 380 aaPredicted RBP13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 RTL4Q6ZR62 310 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 MILR1Q7Z6M3 343 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 MRGPRGQ86SM5 289 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 CPSF7Q8N684 471 aaKnown RBP13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 PSD4Q8NDX1 1056 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 ACMSDQ8TDX5 336 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 ZNF721Q8TF20 911 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 PHF10Q8WUB8 498 aaKnown RBP13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 TRIM44Q96DX7 344 aaPredicted RBP13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 FBXL20Q96IG2 436 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 RASL10BQ96S79 203 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 BRF2Q9HAW0 419 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 XPR1Q9UBH6 696 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 PCTPQ9UKL6 214 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 ATG4BQ9Y4P1 393 aa13.49□□□□□ -0.25
NIF3L1-205ENST00000409588 CENPEQ02224 2701 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 A0A0A6YYD5 115 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 OR6C76A6NM76 312 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 E9PLN8 166 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 TFECO14948 347 aaPredicted RBP13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 FGF17O60258 216 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 IGKV3-11P04433 115 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 GSTA1P08263 222 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 ABOP16442 354 aa13.48□□□□□ -0.25
NIF3L1-205ENST00000409588 ARL1P40616 181 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms