RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 DMGDHQ9UI17 866 aaKnown RBP8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 SNX6Q9UNH7 406 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 CLDN16Q9Y5I7 305 aa8.45□□□□□ -1.06
SNORD88A-201ENST00000408314 IQANK1A0A1B0GTG1 560 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 HMX2A2RU54 273 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 CCDC151A5D8V7 595 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 OR6C76A6NM76 312 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 CAPN14A8MX76 684 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 TRIM49D1C9J1S8 452 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 PRSS44E7EML9 344 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 PLPP1O14494 284 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 LDB3O75112 727 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 OR2J2O76002 312 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 DCTP40126 519 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 HK2P52789 917 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 NAA20P61599 178 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 RPS13P62277 151 aaKnown RBP8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 RNF4P78317 190 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 PLGLB1Q02325 96 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 MPEG1Q2M385 716 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 SPRED3Q2MJR0 410 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 NDUFAF5Q5TEU4 345 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF468Q5VIY5 522 aaPredicted RBP8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 FRG2Q64ET8 278 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 ARHGAP11AQ6P4F7 1023 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 MRGPRGQ86SM5 289 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 SLC22A16Q86VW1 577 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 SIAH3Q8IW03 269 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 CPSF7Q8N684 471 aaKnown RBP8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 SLC15A4Q8N697 577 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 ZFP62Q8NB50 900 aaPredicted RBP8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 MYRIPQ8NFW9 859 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 C16orf52Q8NHV5 167 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 SLC2A12Q8TD20 617 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 PTPMT1Q8WUK0 201 aaPredicted RBP8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 PHF21BQ96EK2 531 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 CCDC120Q96HB5 630 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 GPR78Q96P69 363 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 FRG2BQ96QU4 278 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 RASL10BQ96S79 203 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 HES7Q9BYE0 225 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 NOL11Q9H8H0 719 aaKnown RBP8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 PPCSQ9HAB8 311 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 SACM1LQ9NTJ5 587 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 FETUBQ9UGM5 382 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 SH3BGRL2Q9UJC5 107 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF223Q9UK11 482 aaPredicted RBP8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 ADAM29Q9UKF5 820 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 PCTPQ9UKL6 214 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 NFU1Q9UMS0 254 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF835Q9Y2P0 537 aa8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 UTP20O75691 2785 aaKnown RBP8.44□□□□□ -1.06
SNORD88A-201ENST00000408314 A0A0A6YYD5 115 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 GOLGA6L10A6NI86 522 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 E9PLN8 166 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 TGFBR3LH3BV60 316 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 WWP2O00308 870 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 SAP18O00422 153 aaKnown RBP8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 PROM1O43490 865 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 FGF17O60258 216 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 SH3BGRLO75368 114 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 SIX3O95343 332 aaPredicted RBP8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 GPR75O95800 540 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 P04436 131 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 RPS17P08708 135 aaKnown RBP8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 FAM58BPP0C7Q3 252 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 HSD3B1P14060 373 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 HSD3B2P26439 372 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 PIK3R1P27986 724 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 GMPRP36959 345 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 TMED10P49755 219 aaKnown RBP8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 RPP38P78345 283 aaKnown RBP8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 FOLH1Q04609 750 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 C3AR1Q16581 482 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 HLA-DQA1Q5Y7H0 255 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 TMEM211Q6ICI0 200 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 IL20RBQ6UXL0 311 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 RNF111Q6ZNA4 994 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 TIFABQ6ZNK6 161 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 MILR1Q7Z6M3 343 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 SLC22A9Q8IVM8 553 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 SULF2Q8IWU5 870 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 HOMEZQ8IX15 550 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 TAGAPQ8N103 731 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 WDR20Q8TBZ3 569 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 ACMSDQ8TDX5 336 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 DCAKDQ8WVC6 231 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 ITLN2Q8WWU7 325 aaPredicted RBP8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 RIT1Q92963 219 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 ANKRD9Q96BM1 317 aaPredicted RBP8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 VKORC1Q9BQB6 163 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 FAM173AQ9BQD7 235 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 C1QTNF3Q9BXJ4 246 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 TSPAN10Q9H1Z9 355 aaPredicted RBP8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 TP63Q9H3D4 680 aaPredicted RBP8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 BRF2Q9HAW0 419 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 COQ3Q9NZJ6 369 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 PSMC3IPQ9P2W1 217 aaPredicted RBP8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 TRPS1Q9UHF7 1281 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 PSME2Q9UL46 239 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms