RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 TNFRSF17Q02223 184 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 SLC34A1Q06495 639 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 PRTGQ2VWP7 1150 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 DEFB110Q30KQ9 67 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 MTX3Q5HYI7 312 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 GARNL3Q5VVW2 1013 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 PRSS42Q7Z5A4 293 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 SAMD14Q8IZD0 417 aaPredicted RBP19.85■□□□□ 0.77
TPM1-208ENST00000404484 ZFP90Q8TF47 636 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 PYDC1Q8WXC3 89 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 POP5Q969H6 163 aaKnown RBP19.85■□□□□ 0.77
TPM1-208ENST00000404484 REXO5Q96IC2 774 aaKnown RBP19.85■□□□□ 0.77
TPM1-208ENST00000404484 ZNF285Q96NJ3 590 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 ANKHQ9HCJ1 492 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 SEMA5BQ9P283 1151 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 GMPR2Q9P2T1 348 aaKnown RBP19.85■□□□□ 0.77
TPM1-208ENST00000404484 PCDHGA1Q9Y5H4 931 aa19.85■□□□□ 0.77
TPM1-208ENST00000404484 ASPMQ8IZT6 3477 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 KRT75O95678 551 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 ABCB1P08183 1280 aaPredicted RBP19.84■□□□□ 0.77
TPM1-208ENST00000404484 CKMT1AP12532 417 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 ACP1P24666 158 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 CD1CP29017 333 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 OR4D2P58180 307 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 MRPS22P82650 360 aaKnown RBP19.84■□□□□ 0.77
TPM1-208ENST00000404484 DAB2P98082 770 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 SQSTM1Q13501 440 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 CYP51A1Q16850 503 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 SLC48A1Q6P1K1 146 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 ERICH5Q6P6B1 374 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 DHRS13Q6UX07 377 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 CYP2R1Q6VVX0 501 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 MICU2Q8IYU8 434 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 BBS4Q96RK4 519 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 MAPKAP1Q9BPZ7 522 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 NKX1-2Q9UD57 310 aaPredicted RBP19.84■□□□□ 0.77
TPM1-208ENST00000404484 DAPP1Q9UN19 280 aa19.84■□□□□ 0.77
TPM1-208ENST00000404484 GALR3O60755 368 aaPredicted RBP19.83■□□□□ 0.77
TPM1-208ENST00000404484 ANPEPP15144 967 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 ATP6V1B2P21281 511 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 UQCRC2P22695 453 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 CPN2P22792 545 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 HSD11B2P80365 405 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 GAB1Q13480 694 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 PRSS53Q2L4Q9 553 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 IRAK1BP1Q5VVH5 260 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 DUS3LQ96G46 650 aaKnown RBP19.83■□□□□ 0.77
TPM1-208ENST00000404484 NSMCE2Q96MF7 247 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 DPYSL5Q9BPU6 564 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 SLC35A5Q9BS91 424 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 EFHD1Q9BUP0 239 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 PIF1Q9H611 641 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 KLHL3Q9UH77 587 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 KLK13Q9UKR3 277 aa19.83■□□□□ 0.77
TPM1-208ENST00000404484 EME2A4GXA9 379 aaPredicted RBP19.83■□□□□ 0.76
TPM1-208ENST00000404484 TOX3O15405 576 aaPredicted RBP19.83■□□□□ 0.76
TPM1-208ENST00000404484 RFPL3O75679 317 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 IL1RNP18510 177 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 GGT1P19440 569 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 SOAT1P35610 550 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 CHI3L1P36222 383 aaPredicted RBP19.83■□□□□ 0.76
TPM1-208ENST00000404484 GABRA4P48169 554 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 DUSP3P51452 185 aaPredicted RBP19.83■□□□□ 0.76
TPM1-208ENST00000404484 EMP3P54852 163 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 LIM2P55344 173 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 SPIDRQ14159 915 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 TMTC4Q5T4D3 741 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 GLYATQ6IB77 296 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 OR52E8Q6IFG1 317 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 GPR155Q7Z3F1 870 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 PACS2Q86VP3 889 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 IRAK4Q9NWZ3 460 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 KCMF1Q9P0J7 381 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 ERVK-11Q9UQG0 969 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 ZNF780BQ9Y6R6 833 aa19.83■□□□□ 0.76
TPM1-208ENST00000404484 FRYQ5TBA9 3013 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 CPED1A4D0V7 1026 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 BAG2O95816 211 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 GPIP06744 558 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 UMPSP11172 480 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 CSF2RBP32927 897 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 GZMMP51124 257 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 POLE2P56282 527 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 VAC14Q08AM6 782 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 FADDQ13158 208 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 FAM53BQ14153 422 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 CPZQ66K79 652 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 C18orf63Q68DL7 685 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 GUSBP11Q6P575 273 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 DTWD1Q8N5C7 304 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 PSMA8Q8TAA3 256 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 GORASP2Q9H8Y8 452 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 CLK4Q9HAZ1 481 aaKnown RBP19.82■□□□□ 0.76
TPM1-208ENST00000404484 SLAMF7Q9NQ25 335 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 C5AR2Q9P296 337 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 CES1P1Q9UKY3 287 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 NAALAD2Q9Y3Q0 740 aa19.82■□□□□ 0.76
TPM1-208ENST00000404484 RP1P56715 2156 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 AKAP13Q12802 2813 aa19.81■□□□□ 0.76
TPM1-208ENST00000404484 MYO1GB0I1T2 1018 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms