RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 MAGP20916 626 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 GABRR1P24046 479 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 EEF1B2P24534 225 aaKnown RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 CDH5P33151 784 aaPredicted RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 TSPAN7P41732 249 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 XCR1P46094 333 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF136P52737 540 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 SUCLG1P53597 346 aaKnown RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 MFAP2P55001 183 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 HERVK_113P61574 105 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 PSMC6P62333 389 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 MC1RQ01726 317 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 MEF2BQ02080 365 aaPredicted RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 CSTF1Q05048 431 aaKnown RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 RBPJQ06330 500 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 IL10RBQ08334 325 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 ABRQ12979 859 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 TNK1Q13470 666 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 PDE7AQ13946 482 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 DHX8Q14562 1220 aaKnown RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 SLC17A1Q14916 467 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 EMC2Q15006 297 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 PPA1Q15181 289 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 RPS6KA1Q15418 735 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 ZRSR2Q15696 482 aaKnown RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 PRR4Q16378 134 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF630Q2M218 657 aaPredicted RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 WSCD2Q2TBF2 565 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 LETM2Q2VYF4 491 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF528Q3MIS6 628 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 FAM174BQ3ZCQ3 159 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 CCDC30Q5VVM6 783 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 SUSD4Q5VX71 490 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 SLC25A34Q6PIV7 304 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 MOXD1Q6UVY6 613 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF730Q6ZMV8 503 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 MOB1BQ7L9L4 216 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 CAMKMTQ7Z624 323 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 LINC01551Q86U37 167 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 TLK2Q86UE8 772 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 UNC5CLQ8IV45 518 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 SAXO1Q8IYX7 474 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 APCDD1Q8J025 514 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 TAGAPQ8N103 731 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 CADM2Q8N3J6 435 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 CERS5Q8N5B7 392 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 RNF149Q8NC42 400 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 NAXEQ8NCW5 288 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 GPR148Q8TDV2 347 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 GRK7Q8WTQ7 553 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 TFB1MQ8WVM0 346 aaKnown RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 ARNTL2Q8WYA1 636 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 BPIFA2Q96DR5 249 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 FAM120BQ96EK7 910 aaKnown RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 C16orf58Q96GQ5 468 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 DHTKD1Q96HY7 919 aaPredicted RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 FOPNLQ96NB1 174 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 MUS81Q96NY9 551 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 PLEKHF1Q96S99 279 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 CCDC106Q9BWC9 280 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 APOL6Q9BWW8 343 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 GTPBP2Q9BX10 602 aaKnown RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 TEX12Q9BXU0 123 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 NACAP1Q9BZK3 213 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 TRIM7Q9C029 511 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 UBA5Q9GZZ9 404 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 DPEP3Q9H4B8 488 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 EHD1Q9H4M9 534 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 C5orf66Q9H5L9 145 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 SYNCQ9H7C4 482 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 ANKZF1Q9H8Y5 726 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 RAB9BQ9NP90 201 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 MIEF1Q9NQG6 463 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 PIH1D3Q9NQM4 214 aaKnown RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 GIMAP4Q9NUV9 329 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 MED17Q9NVC6 651 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 DPM3Q9P2X0 92 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 SEC14L4Q9UDX3 406 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 LEF1Q9UJU2 399 aaPredicted RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF221Q9UK13 617 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 GMEB2Q9UKD1 530 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 RUVBL2Q9Y230 463 aaKnown RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 PRG3Q9Y2Y8 225 aaPredicted RBP0.23□□□□□ -2.37
SNORD28-201ENST00000384706 PCDHGA1Q9Y5H4 931 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 FLVCR1Q9Y5Y0 555 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 GPR179Q6PRD1 2367 aa0.23□□□□□ -2.37
SNORD28-201ENST00000384706 PARD3Q8TEW0 1356 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 HEG1Q9ULI3 1381 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 MUC16Q8WXI7 14507 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 IGLV4-69A0A075B6H9 119 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 IGLV2-18A0A075B6J9 118 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 hCG_1809904A0A1W2PP81 198 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 A0A1W2PPE2 198 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 A0A1W2PR64 198 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 A6NCN8 305 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 USP27XA6NNY8 438 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 AGAP14A8MT82 685 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 FAM166BA8MTA8 275 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 NPIPA3F8WFD2 350 aa0.22□□□□□ -2.37
SNORD28-201ENST00000384706 G3V3Y1 287 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms