RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 OR4C15Q8NGM1 316 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 OR51A7Q8NH64 312 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 L3HYPDHQ96EM0 354 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 PTCHD1Q96NR3 888 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 P2RY13Q9BPV8 354 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 UNC119BA6NIH7 251 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 SCGB1D2O95969 90 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 PMS2P3Q13401 168 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 HSD17B12Q53GQ0 312 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 WDR45BQ5MNZ6 344 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 OGFRL1Q5TC84 451 aaPredicted RBP15.38■□□□□ 0.05
COL2A1-202ENST00000380518 KANK2Q63ZY3 851 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 F2RL3Q96RI0 385 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 TREM1Q9NP99 234 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 SLCO3A1Q9UIG8 710 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 SARDHQ9UL12 918 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 FARSAQ9Y285 508 aaKnown RBP15.38■□□□□ 0.05
COL2A1-202ENST00000380518 AXIN1O15169 862 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 DENRO43583 198 aaKnown RBP15.38■□□□□ 0.05
COL2A1-202ENST00000380518 TRAPPC6AO75865 159 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 OAZ2O95190 189 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 CYP17A1P05093 508 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 RCAN2Q14206 197 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 ELOCQ15369 112 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 SPHARQ15513 63 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 TMEM35AQ53FP2 167 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 ZNF648Q5T619 568 aaPredicted RBP15.38■□□□□ 0.05
COL2A1-202ENST00000380518 NXPE4Q6UWF7 544 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 RAD9AQ99638 391 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 DPH7Q9BTV6 452 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 FAM118AQ9NWS6 357 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 ZFR2Q9UPR6 939 aaKnown RBP15.38■□□□□ 0.05
COL2A1-202ENST00000380518 NOX1Q9Y5S8 564 aa15.38■□□□□ 0.05
COL2A1-202ENST00000380518 C2orf78A6NCI8 922 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 HCRTR2O43614 444 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 SUOXP51687 545 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 SH3BP2P78314 561 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 UGT3A2Q3SY77 523 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 ISCA2Q86U28 154 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 FCAMRQ8WWV6 532 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 KCNN1Q92952 543 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 HS6ST2Q96MM7 605 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 TTTY10Q9BZA0 68 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 ASB6Q9NWX5 421 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 RDH8Q9NYR8 311 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 TMEM14AQ9Y6G1 99 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 EIF3FO00303 357 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-202ENST00000380518 HOXA11P31270 313 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-202ENST00000380518 ZNF252P-AS1Q0IIN9 211 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 PON2Q15165 354 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 CTC1Q2NKJ3 1217 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 RANBP10Q6VN20 620 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 LRRC25Q8N386 305 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-202ENST00000380518 ZDHHC12Q96GR4 267 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 PAAF1Q9BRP4 392 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 IRF2BPLQ9H1B7 796 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 A0A1W2PP55 124 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 FAM221BA6H8Z2 402 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 AURKAO14965 403 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 CBLP22681 906 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 PIGFQ07326 219 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 UGT8Q16880 541 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 ZNF423Q2M1K9 1284 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 ARMCX6Q7L4S7 300 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 OR52P1PQ8NH57 321 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 HUS1BQ8NHY5 278 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 IL17FQ96PD4 163 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 NPLQ9BXD5 320 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-202ENST00000380518 FANCFQ9NPI8 374 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 PCTPQ9UKL6 214 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 GABRQQ9UN88 632 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 MYOCOSA0A1B0GUC4 107 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 SOBPA7XYQ1 873 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 AK1P00568 194 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 SPARCP09486 303 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 GABARAPL2P60520 117 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 GAS6Q14393 721 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 C1orf189Q5VU69 101 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 PM20D1Q6GTS8 502 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 OR56A3Q8NH54 315 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 AKAP1Q92667 903 aaKnown RBP eCLIP15.37■□□□□ 0.05
COL2A1-202ENST00000380518 DPH2Q9BQC3 489 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-202ENST00000380518 PELOQ9BRX2 385 aaKnown RBP15.37■□□□□ 0.05
COL2A1-202ENST00000380518 RBCK1Q9BYM8 510 aa15.37■□□□□ 0.05
COL2A1-202ENST00000380518 ZCWPW2A0A1B0GU75 182 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 VSTM5A8MXK1 200 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 HSPA12AO43301 675 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 GPR143P51810 404 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 HERV-K104P61576 105 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 OR52E8Q6IFG1 317 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 FIP1L1Q6UN15 594 aaKnown RBP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 Q8N9G6 341 aaPredicted RBP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 OR8K3Q8NH51 312 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 TRIM43Q96BQ3 446 aaPredicted RBP15.36■□□□□ 0.05
COL2A1-202ENST00000380518 STRA6Q9BX79 667 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 BEX2Q9BXY8 128 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 BEX1Q9HBH7 125 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 CARD8Q9Y2G2 431 aa15.36■□□□□ 0.05
COL2A1-202ENST00000380518 WDR37Q9Y2I8 494 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms