RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 A0A0B4J293 547 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 RNASET2O00584 256 aaKnown RBP10.57□□□□□ -0.72
CCDC40-203ENST00000374877 IFNA14P01570 189 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 RPS13P62277 151 aaKnown RBP10.57□□□□□ -0.72
CCDC40-203ENST00000374877 CYP4F8P98187 520 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 TXNDC8Q6A555 127 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 TRIM40Q6P9F5 258 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 CASP12Q6UXS9 341 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 ZNF783Q6ZMS7 281 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 RFPL4BQ6ZWI9 263 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 ARL14EPQ8N8R7 260 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-203ENST00000374877 HUS1BQ8NHY5 278 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 RNF31Q96EP0 1072 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 MAGEB10Q96LZ2 347 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-203ENST00000374877 RIPOR3Q96MK2 946 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 WDFY2Q96P53 400 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 TOR4AQ9NXH8 423 aa10.57□□□□□ -0.72
CCDC40-203ENST00000374877 LSM7Q9UK45 103 aaKnown RBP10.57□□□□□ -0.72
CCDC40-203ENST00000374877 LSM2Q9Y333 95 aaKnown RBP10.57□□□□□ -0.72
CCDC40-203ENST00000374877 TRBV4-1A0A0J9YWV2 114 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 SERTM1A2A2V5 107 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 HYKKA2RU49 373 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 GFYI3L273 518 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 GREM1O60565 184 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 TIA1P31483 386 aaKnown RBP eCLIP10.56□□□□□ -0.72
CCDC40-203ENST00000374877 KIR2DL3P43628 341 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 SLC5A12Q1EHB4 618 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 PLET1Q6UQ28 207 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 GDPGP1Q6ZNW5 385 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 USP30Q70CQ3 517 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 TCEANCQ8N8B7 351 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 SUN5Q8TC36 379 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 ADAMTS19Q8TE59 1207 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 MIXL1Q9H2W2 232 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 MALT1Q9UDY8 824 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 TMCC3Q9ULS5 477 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 DNMT3AQ9Y6K1 912 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-203ENST00000374877 IQCMA0A1B0GVH7 501 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 OR2AG2A6NM03 316 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 AGAP14A8MT82 685 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 A8MVJ9 347 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 ZNF197O14709 1029 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 ARHGEF9O43307 516 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 OR10H3O60404 316 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 IGSF6O95976 241 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 C1SP09871 688 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 PIPP12273 146 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-203ENST00000374877 GPC1P35052 558 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 ZNF91Q05481 1191 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 DUSP7Q16829 419 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 GLYR1Q49A26 553 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-203ENST00000374877 CEP78Q5JTW2 689 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 SLC35F1Q5T1Q4 408 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 FAM180BQ6P0A1 224 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 XKRXQ6PP77 449 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 TPRG1Q6ZUI0 275 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 HTR3DQ70Z44 454 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 WDR53Q7Z5U6 358 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-203ENST00000374877 GLCCI1Q86VQ1 547 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 PHC2Q8IXK0 858 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 LAS2Q8IYD9 372 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 CELF5Q8N6W0 485 aaKnown RBP10.56□□□□□ -0.72
CCDC40-203ENST00000374877 YIPF7Q8N8F6 280 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 OR7G3Q8NG95 312 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 SLC22A12Q96S37 553 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 TSSK6Q9BXA6 273 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 SLC25A19Q9HC21 320 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 ACOXLQ9NUZ1 547 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 DZANK1Q9NVP4 752 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 KLHL42Q9P2K6 505 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 MAPRE3Q9UPY8 281 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 HCFC2Q9Y5Z7 792 aa10.56□□□□□ -0.72
CCDC40-203ENST00000374877 A0A1W2PRU2 124 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 EIF3FO00303 357 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 KPNA5O15131 536 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SOCS5O75159 536 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 MPC1LP0DKB6 136 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 ATP1B2P14415 290 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 RHCEP18577 417 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 LHCGRP22888 699 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 C21orf58P58505 322 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SNRPD2P62316 118 aaKnown RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 RBBP4Q09028 425 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 FCHO2Q0JRZ9 810 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SP140Q13342 867 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 CCSMST1Q4G0I0 132 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 DDI2Q5TDH0 399 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SAXO2Q658L1 398 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 AGTRAPQ6RW13 159 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 TMIGD1Q6UXZ0 262 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 RDH10Q8IZV5 341 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 CPXM2Q8N436 756 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 OXR1Q8N573 874 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SLC25A46Q96AG3 418 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 PPCDCQ96CD2 204 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 C11orf24Q96F05 449 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 ALG14Q96F25 216 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 UCK2Q9BZX2 261 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 REEP4Q9H6H4 257 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SLC28A3Q9HAS3 691 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms