RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 CCT3P49368 545 aaKnown RBP13.12□□□□□ -0.31
LSS-201ENST00000356396 NUDT6P53370 316 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 CLDN6P56747 220 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 LAIR1Q6GTX8 287 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 BCDIN3DQ7Z5W3 292 aaKnown RBP13.12□□□□□ -0.31
LSS-201ENST00000356396 ZNF614Q8N883 585 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 SLC38A5Q8WUX1 472 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 TMEM19Q96HH6 336 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 COL21A1Q96P44 957 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 CCDC90BQ9GZT6 254 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 SIRT3Q9NTG7 399 aaPredicted RBP13.12□□□□□ -0.31
LSS-201ENST00000356396 USP36Q9P275 1121 aaKnown RBP13.12□□□□□ -0.31
LSS-201ENST00000356396 ATXN7L1Q9ULK2 861 aaPredicted RBP13.12□□□□□ -0.31
LSS-201ENST00000356396 COLEC10Q9Y6Z7 277 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 PCDH17O14917 1159 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 ALAS2P22557 587 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 CMPK1P30085 196 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 FOXM1Q08050 763 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 NADK2Q4G0N4 442 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 AASDHQ4L235 1098 aaPredicted RBP13.12□□□□□ -0.31
LSS-201ENST00000356396 COQ5Q5HYK3 327 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 DESI1Q6ICB0 168 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 USP30Q70CQ3 517 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 P3H2Q8IVL5 708 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 ATG16L2Q8NAA4 619 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 NAA50Q9GZZ1 169 aaKnown RBP13.12□□□□□ -0.31
LSS-201ENST00000356396 CXorf56Q9H5V9 222 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 DHCR7Q9UBM7 475 aaKnown RBP13.12□□□□□ -0.31
LSS-201ENST00000356396 MAN2B2Q9Y2E5 1009 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 KIF26BQ2KJY2 2108 aa13.12□□□□□ -0.31
LSS-201ENST00000356396 A6NCN8 305 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 PRAMEF26H0Y7S4 382 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 FOXE1O00358 373 aaPredicted RBP13.11□□□□□ -0.31
LSS-201ENST00000356396 ERGP11308 486 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 DDCP20711 480 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 CDK6Q00534 326 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 ATP6AP1Q15904 470 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 FAAH2Q6GMR7 532 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 TRIM40Q6P9F5 258 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 TTC33Q6PID6 262 aaPredicted RBP13.11□□□□□ -0.31
LSS-201ENST00000356396 CHERPQ8IWX8 916 aaKnown RBP13.11□□□□□ -0.31
LSS-201ENST00000356396 FBXO15Q8NCQ5 510 aaPredicted RBP13.11□□□□□ -0.31
LSS-201ENST00000356396 SETD7Q8WTS6 366 aaKnown RBP13.11□□□□□ -0.31
LSS-201ENST00000356396 TSPEARQ8WU66 669 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 COQ8BQ96D53 544 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 REXO5Q96IC2 774 aaKnown RBP13.11□□□□□ -0.31
LSS-201ENST00000356396 ZNF597Q96LX8 424 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 OR51I1Q9H343 314 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 DDX18Q9NVP1 670 aaKnown RBP13.11□□□□□ -0.31
LSS-201ENST00000356396 FAM120CQ9NX05 1096 aaKnown RBP13.11□□□□□ -0.31
LSS-201ENST00000356396 NAALAD2Q9Y3Q0 740 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 DENND4AQ7Z401 1863 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 CHURC1-FNTBB4DL54 471 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 SLC28A2O43868 658 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 TFAP2AP05549 437 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 BMP2P12643 396 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 GPX2P18283 190 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 FNTBP49356 437 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 DHPSP49366 369 aaPredicted RBP13.11□□□□□ -0.31
LSS-201ENST00000356396 OR1D5P58170 312 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 NAA20P61599 178 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 MLLT1Q03111 559 aaPredicted RBP13.11□□□□□ -0.31
LSS-201ENST00000356396 PIN1Q13526 163 aaPredicted RBP13.11□□□□□ -0.31
LSS-201ENST00000356396 LRIT3Q3SXY7 679 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 ABRAXAS1Q6UWZ7 409 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 BPIFB6Q8NFQ5 453 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 FLVCR1-AS1Q8TAF5 88 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 STON2Q8WXE9 905 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 PIK3R3Q92569 461 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 CCDC115Q96NT0 180 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 WASH6PQ9NQA3 447 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 SOHLH2Q9NX45 425 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 TMEM184BQ9Y519 407 aaPredicted RBP13.11□□□□□ -0.31
LSS-201ENST00000356396 PCDHGA8Q9Y5G5 932 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 GPIP06744 558 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 CPMP14384 443 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 ASMTP46597 345 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 BTG2P78543 158 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 PPP4R4Q6NUP7 873 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 SYT13Q7L8C5 426 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 PROSER1Q86XN7 944 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 SLC16A11Q8NCK7 471 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 SUN3Q8TAQ9 357 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 NIPSNAP1Q9BPW8 284 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 C1GALT1Q9NS00 363 aa13.11□□□□□ -0.31
LSS-201ENST00000356396 DMXL2Q8TDJ6 3036 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 GNB5O14775 395 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 PRPH2P23942 346 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 CD38P28907 300 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 PIK3CBP42338 1070 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 DAPP51397 102 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 GPAT3Q53EU6 434 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 MFSD4BQ5TF39 518 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 C1orf189Q5VU69 101 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 GALNT18Q6P9A2 607 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 RAB42Q8N4Z0 105 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 DHRSXQ8N5I4 330 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 TFAP2CQ92754 450 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 PEX11GQ96HA9 241 aa13.1□□□□□ -0.31
LSS-201ENST00000356396 CCDC3Q9BQI4 270 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms