RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 OR4D2P58180 307 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 TRA2BP62995 288 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 IL23RQ5VWK5 629 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 CPEB2Q7Z5Q1 589 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 LIX1Q8N485 282 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 DNAJB14Q8TBM8 379 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 DOK4Q8TEW6 326 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 THAP4Q8WY91 577 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 TANKQ92844 425 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 METTL2AQ96IZ6 378 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 ALOXE3Q9BYJ1 711 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 PNO1Q9NRX1 252 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 NBEAQ8NFP9 2946 aa16.76■□□□□ 0.27
PDLIM7-202ENST00000355841 LOC102723996A0A087X1L8 192 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 IGHV1-45A0A0A0MS14 117 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 TRPC5OSA6NMA1 111 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 AKAP10O43572 662 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 EDF1O60869 148 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 DIAPH2O60879 1101 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 DNAJB5O75953 348 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 PRR35P0CG20 571 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 C2orf80Q0P641 193 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 SF3A3Q12874 501 aaKnown RBP eCLIP16.75■□□□□ 0.271e-6■■■■■ 45.3
PDLIM7-202ENST00000355841 PCOLCEQ15113 449 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 OR52E8Q6IFG1 317 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 LARP4Q71RC2 724 aaKnown RBP eCLIP16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 ZNF771Q7L3S4 317 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 TMEM132CQ8N3T6 1108 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 NUDT8Q8WV74 236 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 WDR77Q9BQA1 342 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 FAIM2Q9BWQ8 316 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 PRORYQ9H606 182 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 ZNF160Q9HCG1 818 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 CES1P1Q9UKY3 287 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 EXO1Q9UQ84 846 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 TMED5Q9Y3A6 229 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 C1orf226A1L170 272 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 ERAL1O75616 437 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 IFNA16P05015 189 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 VIMP08670 466 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 DIO3P55073 304 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 ACTN3Q08043 901 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 PTGR1Q14914 329 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 PRSS53Q2L4Q9 553 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 DCAF10Q5QP82 559 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 NXNQ6DKJ4 435 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 FAM71E1Q6IPT2 247 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 SLC48A1Q6P1K1 146 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 SNRNP27Q8WVK2 155 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 EXTL1Q92935 676 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 NACC2Q96BF6 587 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 PPWD1Q96BP3 646 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 OR52B2Q96RD2 323 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 TRIM55Q9BYV6 548 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 MYNNQ9NPC7 610 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 FGFR1OP2Q9NVK5 253 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 C19orf25Q9UFG5 118 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 KCNMB2Q9Y691 235 aa16.75■□□□□ 0.27
PDLIM7-202ENST00000355841 BLACEA4D250 179 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 GPR75O95800 540 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 CELA2AP08217 269 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 CYC1P08574 325 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 G6PDP11413 515 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 PTGER1P34995 402 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 AQP5P55064 265 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 EMX2Q04743 252 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 HEPACAMQ14CZ8 416 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 ANKRD26P1Q6NSI1 321 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 DGAT2L6Q6ZPD8 337 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 NDUFAF7Q7L592 441 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 EXOSC8Q96B26 276 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 KLHL29Q96CT2 875 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 EBF4Q9BQW3 602 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 ZNF700Q9H0M5 742 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 ING2Q9H160 280 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 NPHS2Q9NP85 383 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 UTS2RQ9UKP6 389 aa16.74■□□□□ 0.27
PDLIM7-202ENST00000355841 NSG1A0A0A6YYJ2 146 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 A6NL46 340 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 VPS4BO75351 444 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 ALDOCP09972 364 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 LBPP18428 481 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 FEN1P39748 380 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 ERVK-8P63133 956 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 Q0VFX4 171 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 TBR1Q16650 682 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 TMEM198Q66K66 360 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 PAPD4Q6PIY7 484 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 EPGNQ6UW88 154 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 GPR155Q7Z3F1 870 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 TICAM1Q8IUC6 712 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 PARP9Q8IXQ6 854 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 OR4K14Q8NGD5 310 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 RFWD2Q8NHY2 731 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 MARK4Q96L34 752 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 IP6K3Q96PC2 410 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 DCTN4Q9UJW0 460 aa16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 G3BP2Q9UN86 482 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-202ENST00000355841 EIF3LQ9Y262 564 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms