RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 DEPDC1Q5TB30 811 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 LGSNQ5TDP6 509 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 GPR180Q86V85 440 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 CYP4Z2PQ8N1L4 340 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 CPSF7Q8N684 471 aaKnown RBP9.1□□□□□ -0.95
CCDC58-201ENST00000291458 TMEM178AQ8NBL3 297 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 OR4F6Q8NGB9 312 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 SLC2A12Q8TD20 617 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 TRPC4APQ8TEL6 797 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 UCN3Q969E3 161 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 TMEM125Q96AQ2 219 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 ANKRD9Q96BM1 317 aaPredicted RBP9.1□□□□□ -0.95
CCDC58-201ENST00000291458 PPWD1Q96BP3 646 aaKnown RBP9.1□□□□□ -0.95
CCDC58-201ENST00000291458 DGAT2Q96PD7 388 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 TMEM237Q96Q45 408 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 MRPL57Q9BQC6 102 aaKnown RBP9.1□□□□□ -0.95
CCDC58-201ENST00000291458 MRPL1Q9BYD6 325 aaKnown RBP9.1□□□□□ -0.95
CCDC58-201ENST00000291458 ELOVL6Q9H5J4 265 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 CLK4Q9HAZ1 481 aaKnown RBP9.1□□□□□ -0.95
CCDC58-201ENST00000291458 ZBTB26Q9HCK0 441 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 FARSBQ9NSD9 589 aaKnown RBP9.1□□□□□ -0.95
CCDC58-201ENST00000291458 TMEM216Q9P0N5 145 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 PLEKHB1Q9UF11 243 aaPredicted RBP9.1□□□□□ -0.95
CCDC58-201ENST00000291458 PHF11Q9UIL8 331 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 NPIPA1Q9UND3 350 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 SLC12A4Q9UP95 1085 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 ATG4BQ9Y4P1 393 aa9.1□□□□□ -0.95
CCDC58-201ENST00000291458 DIDO1Q9BTC0 2240 aaKnown RBP9.1□□□□□ -0.95
CCDC58-201ENST00000291458 IQANK1A0A1B0GTG1 560 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 A0A1W2PS29 197 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 A8MVJ9 347 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 H0YIV9 168 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 STX16-NPEPL1H3BU86 382 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 HRKO00198 91 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 STX16O14662 325 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 OR10H2O60403 315 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 CDC40O60508 579 aaKnown RBP eCLIP9.09□□□□□ -0.95
CCDC58-201ENST00000291458 ZG16O60844 167 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 CTNSO60931 367 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 NEURL1O76050 574 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 SUPT7LO94864 414 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 OR4F21O95013 312 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 AIFM1O95831 613 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 LDLRP01130 860 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 SP1P08047 785 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 SBK3P0C264 359 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 GP1BBP13224 206 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 ZNF24P17028 368 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 TAC1P20366 129 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 PTGER1P34995 402 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 BUD31P41223 144 aaPredicted RBP9.09□□□□□ -0.95
CCDC58-201ENST00000291458 SOX3P41225 446 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 PIK3CBP42338 1070 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 MEOX1P50221 254 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 SSR4P51571 173 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 PLIN5Q00G26 463 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 FOLH1Q04609 750 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 E2F2Q14209 437 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 C4orf17Q53FE4 359 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 FRG2Q64ET8 278 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 SLC25A25Q6KCM7 469 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 RPUSD3Q6P087 351 aaKnown RBP9.09□□□□□ -0.95
CCDC58-201ENST00000291458 LETMD1Q6P1Q0 360 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 DGAT2L6Q6ZPD8 337 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 MILR1Q7Z6M3 343 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 NUDT13Q86X67 352 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 MMP21Q8N119 569 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 TMEM132CQ8N3T6 1108 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 HORMAD2Q8N7B1 307 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 CDYL2Q8N8U2 506 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 L3MBTL4Q8NA19 623 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 FAM98AQ8NCA5 519 aaKnown RBP9.09□□□□□ -0.95
CCDC58-201ENST00000291458 OR14A16Q8NHC5 309 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 WDR20Q8TBZ3 569 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 EPS8L3Q8TE67 593 aaKnown RBP9.09□□□□□ -0.95
CCDC58-201ENST00000291458 ASB15Q8WXK1 588 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 ZNF775Q96BV0 537 aaPredicted RBP9.09□□□□□ -0.95
CCDC58-201ENST00000291458 MAGED4Q96JG8 741 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 FRMD6Q96NE9 622 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 FRG2BQ96QU4 278 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 GAL3ST4Q96RP7 486 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 BARD1Q99728 777 aaKnown RBP9.09□□□□□ -0.95
CCDC58-201ENST00000291458 ZNF717Q9BY31 904 aaPredicted RBP9.09□□□□□ -0.95
CCDC58-201ENST00000291458 EPB41L4BQ9H329 900 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 RPF2Q9H7B2 306 aaKnown RBP9.09□□□□□ -0.95
CCDC58-201ENST00000291458 HPF1Q9NWY4 346 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 TEX10Q9NXF1 929 aaPredicted RBP9.09□□□□□ -0.95
CCDC58-201ENST00000291458 COPS7AQ9UBW8 275 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 ADGRE2Q9UHX3 823 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 TMCO1Q9UM00 188 aa9.09□□□□□ -0.95
CCDC58-201ENST00000291458 A0A0A6YYD5 115 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 A0A0G2JMM0 328 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 A0A1W2PPB8 328 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 A0A1W2PPM1 405 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 A0A1W2PR48 441 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 A0A1W2PRS3 328 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 CCDC189A1A4V9 331 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 SLC35F4A4IF30 521 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 A6NJY4 79 aa9.08□□□□□ -0.96
CCDC58-201ENST00000291458 FAM166BA8MTA8 275 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms