RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 PITHD1Q9GZP4 211 aaPredicted RBP14.35□□□□□ -0.11
TRIM3-215ENST00000639856 NT5DC2Q9H857 520 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 IGKV1-8A0A0C4DH67 115 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 A0A1W2PPW3 197 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 RTCAO00442 366 aaKnown RBP14.35□□□□□ -0.11
TRIM3-215ENST00000639856 ADAMDEC1O15204 470 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 CAPN5O15484 640 aaPredicted RBP14.35□□□□□ -0.11
TRIM3-215ENST00000639856 FOSL2P15408 326 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 DDCP20711 480 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 UQCRC2P22695 453 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 SRP54P61011 504 aaKnown RBP14.35□□□□□ -0.11
TRIM3-215ENST00000639856 CXCR4P61073 352 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 CDK6Q00534 326 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 FZD5Q13467 585 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 UBXN2BQ14CS0 331 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 C11orf91Q3C1V1 193 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 IFI44LQ53G44 452 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 KIAA1614Q5VZ46 1190 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 AP1ARQ63HQ0 302 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 TSPYL5Q86VY4 417 aaPredicted RBP14.35□□□□□ -0.11
TRIM3-215ENST00000639856 ADGRF3Q8IZF5 1079 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 TAMM41Q96BW9 452 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 ZNF347Q96SE7 839 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 TMEM121BQ9BXQ6 578 aaPredicted RBP14.35□□□□□ -0.11
TRIM3-215ENST00000639856 EPS8L2Q9H6S3 715 aa14.35□□□□□ -0.11
TRIM3-215ENST00000639856 TRBV23OR9-2A0A075B6M9 112 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 AXIN1O15169 862 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 XPNPEP2O43895 674 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 TBX19O60806 448 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 ARAFP10398 606 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 JUNDP17535 347 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 EPHA2P29317 976 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 ACTR1BP42025 376 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 PLA2G16P53816 162 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 ACTR1AP61163 376 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 DCTN2Q13561 401 aaKnown RBP14.34□□□□□ -0.11
TRIM3-215ENST00000639856 CRB2Q5IJ48 1285 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 FGD3Q5JSP0 725 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 KIAA0895LQ68EN5 471 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 PLD3Q8IV08 490 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 ZC3H7AQ8IWR0 971 aaKnown RBP14.34□□□□□ -0.11
TRIM3-215ENST00000639856 RAB42Q8N4Z0 105 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 NATD1Q8N6N6 113 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 TSTD1Q8NFU3 115 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 OR2A1Q8NGT9 310 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 OR2L8Q8NGY9 312 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 TM4SF18Q96CE8 201 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 NLNQ9BYT8 704 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 OCEL1Q9H607 264 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 MVB12BQ9H7P6 319 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 PCDHGB1Q9Y5G3 927 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 LYVE1Q9Y5Y7 322 aa14.34□□□□□ -0.11
TRIM3-215ENST00000639856 CHURC1-FNTBB4DL54 471 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 TMX2-CTNND1H3BSU7 103 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 DNAJB5O75953 348 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 ITIH1P19827 911 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 TNFRSF1BP20333 461 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 PCMT1P22061 227 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 PCBP3P57721 371 aaKnown RBP14.33□□□□□ -0.11
TRIM3-215ENST00000639856 NPRL3Q12980 569 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 HEPACAMQ14CZ8 416 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 B3GNT8Q7Z7M8 397 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 RAB2BQ8WUD1 216 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 MUL1Q969V5 352 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 GUCD1Q96NT3 240 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 QRFPRQ96P65 431 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 PITX2Q99697 317 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 TCEAL2Q9H3H9 227 aaPredicted RBP14.33□□□□□ -0.11
TRIM3-215ENST00000639856 CXorf36Q9H7Y0 433 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 THSD1Q9NS62 852 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 SPHK1Q9NYA1 384 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 WSB2Q9NYS7 404 aaPredicted RBP14.33□□□□□ -0.11
TRIM3-215ENST00000639856 ZNF624Q9P2J8 865 aaPredicted RBP14.33□□□□□ -0.11
TRIM3-215ENST00000639856 TPRKBQ9Y3C4 175 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 TESMINQ9Y4I5 508 aa14.33□□□□□ -0.11
TRIM3-215ENST00000639856 E9PQ18 207 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 TNFRSF11BO00300 401 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 IFNA14P01570 189 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 CCNA2P20248 432 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 PEBP1P30086 187 aaKnown RBP14.33□□□□□ -0.12
TRIM3-215ENST00000639856 FMO3P31513 532 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 OR1E2P47887 323 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 PXNP49023 591 aaPredicted RBP14.33□□□□□ -0.12
TRIM3-215ENST00000639856 RGS19P49795 217 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 HPCAP84074 193 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 ZNF542PQ5EBM4 170 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 FAM180BQ6P0A1 224 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 ADCK2Q7Z695 626 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 NRROSQ86YC3 692 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 SLC30A8Q8IWU4 369 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 OR5P2Q8WZ92 322 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 ZNF300Q96RE9 604 aaPredicted RBP14.33□□□□□ -0.12
TRIM3-215ENST00000639856 GABARAPL3Q9BY60 117 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 CCDC90BQ9GZT6 254 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 DUSP21Q9H596 190 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 LHX9Q9NQ69 397 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 SNX8Q9Y5X2 465 aa14.33□□□□□ -0.12
TRIM3-215ENST00000639856 TDRD6O60522 2096 aaKnown RBP14.33□□□□□ -0.12
TRIM3-215ENST00000639856 PRAMEF26H0Y7S4 382 aa14.32□□□□□ -0.12
TRIM3-215ENST00000639856 TNFRSF10CO14798 259 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms