RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 H0Y8X5 98 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 HTR1AP08908 422 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 HOXB3P14651 431 aaPredicted RBP18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 NDUFS1P28331 727 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 CMPK1P30085 196 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 ACSL1P33121 698 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 ARFIP1P53367 373 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 LRRC32Q14392 662 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 NDUFAF5Q5TEU4 345 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 KIAA1614Q5VZ46 1190 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 KIAA1324Q6UXG2 1013 aaKnown RBP18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 C6orf120Q7Z4R8 191 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 CNIH3Q8TBE1 160 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 C12orf43Q96C57 262 aaKnown RBP18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 BMFQ96LC9 184 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 WDR92Q96MX6 357 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 APOL4Q9BPW4 351 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 LIN28AQ9H9Z2 209 aaKnown RBP18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 OR6C2Q9NZP2 312 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 CD207Q9UJ71 328 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 RAB23Q9ULC3 237 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 CA5BQ9Y2D0 317 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 APBB3O95704 486 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 EML2O95834 649 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 NDUFV2P19404 249 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 RPS26P62854 115 aaKnown RBP18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 NPRL3Q12980 569 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 SLC9A5Q14940 896 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 ZNF425Q6IV72 752 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 TSPYL5Q86VY4 417 aaPredicted RBP18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 AMIGO1Q86WK6 493 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 OR4C15Q8NGM1 316 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 GIPC3Q8TF64 312 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 UCN3Q969E3 161 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 FAIM2Q9BWQ8 316 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 PCOLCE2Q9UKZ9 415 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 NAALAD2Q9Y3Q0 740 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 SNX11Q9Y5W9 270 aa18.71■□□□□ 0.59
PCDHB11-202ENST00000624887 PRAMEF10O60809 474 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 B4GALT2O60909 372 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 DNAJB5O75953 348 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 SEC14L2O76054 403 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 ANGPTL1O95841 491 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 HIST1H1TP22492 207 aaPredicted RBP18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 HNRNPA2B1P22626 353 aaKnown RBP18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 AK4P27144 223 aaPredicted RBP18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 TUBA3CQ13748 450 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 SPDYE7PQ495Y7 208 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 TPRG1LQ5T0D9 272 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 GPR107Q5VW38 600 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 TNFAIP8L2Q6P589 184 aaPredicted RBP18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 ABHD17CQ6PCB6 329 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 TMEM92Q6UXU6 159 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 BPIFB6Q8NFQ5 453 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 SLC38A5Q8WUX1 472 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 LCN9Q8WX39 176 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 KCNC2Q96PR1 638 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 PITX2Q99697 317 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 GABARAPL3Q9BY60 117 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 PRDM7Q9NQW5 492 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 PCDHGA4Q9Y5G9 962 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 C4orf51C9J302 202 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 ERI3O43414 337 aaKnown RBP18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 STATHP02808 62 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 CHRM5P08912 532 aaPredicted RBP18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 HTR1BP28222 390 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 EPHA2P29317 976 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 TPMTP51580 245 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 CXCR4P61073 352 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 SPIBQ01892 262 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 MRM1Q6IN84 353 aaKnown RBP18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 SMYD1Q8NB12 490 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 MFSD9Q8NBP5 474 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 OR2L5Q8NG80 312 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 RPLP0P6Q8NHW5 317 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 JPH3Q8WXH2 748 aaPredicted RBP18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 MAGED4Q96JG8 741 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 FAM210AQ96ND0 272 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 MACROD1Q9BQ69 325 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 SLC35C2Q9NQQ7 365 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 PAK1IP1Q9NWT1 392 aaPredicted RBP18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 TMEM9Q9P0T7 183 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 SNX7Q9UNH6 387 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 ASB4Q9Y574 426 aa18.7■□□□□ 0.58
PCDHB11-202ENST00000624887 A0A1B0GVG6 124 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 ISM1B1AKI9 464 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 C5orf58C9J3I9 102 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 H3BQ06 376 aaPredicted RBP18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 MAN2B1O00754 1011 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 TFPTP0C1Z6 253 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 XCR1P46094 333 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 CCT3P49368 545 aaKnown RBP18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 SLAMF1Q13291 335 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 GTF2IRD2BQ6EKJ0 949 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 B3GNT8Q7Z7M8 397 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 GTF2IRD2Q86UP8 949 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 OR4E2Q8NGC2 313 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 TSACCQ96A04 125 aaPredicted RBP18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 AMDHD1Q96NU7 426 aa18.69■□□□□ 0.58
PCDHB11-202ENST00000624887 NODALQ96S42 347 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms