RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 NR6A1Q15406 480 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 SFT2D3Q587I9 215 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 Q6ZSR9 355 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 KIRREL3Q8IZU9 778 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 OR2T11Q8NH01 316 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 TTC9Q92623 222 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 ZNF75CPQ92670 426 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-245ENST00000621399 TANKQ92844 425 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 CCT7Q99832 543 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 ZNF700Q9H0M5 742 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 LRTM1Q9HBL6 345 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 ATP13A2Q9NQ11 1180 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 INTS9Q9NV88 658 aaKnown RBP17.44■□□□□ 0.38
CIRBP-245ENST00000621399 C1orf109Q9NX04 203 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 SIRT5Q9NXA8 310 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 TEX10Q9NXF1 929 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-245ENST00000621399 LOC400499M0QZD8 3231 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 NBEAQ8NFP9 2946 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 A0A1W2PQ72 361 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 TCRBV16S1A1N1A0A5B0 115 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 GLOD5A6NK44 160 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 LDB3O75112 727 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 SNNO75324 88 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-245ENST00000621399 PRKRAO75569 313 aaKnown RBP17.43■□□□□ 0.38
CIRBP-245ENST00000621399 DNAJB5O75953 348 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 SEC24DO94855 1032 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-245ENST00000621399 AIFM1O95831 613 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 ANXA4P09525 319 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-245ENST00000621399 PRPH2P23942 346 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 TIA1P31483 386 aaKnown RBP eCLIP17.43■□□□□ 0.38
CIRBP-245ENST00000621399 POLE2P56282 527 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 TRA2BP62995 288 aaKnown RBP17.43■□□□□ 0.38
CIRBP-245ENST00000621399 PCOLCEQ15113 449 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 LINC00303Q3SY05 128 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 NDUFAF5Q5TEU4 345 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 GALNT18Q6P9A2 607 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 FAM76AQ8TAV0 307 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 TM4SF18Q96CE8 201 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 METTL2AQ96IZ6 378 aaKnown RBP17.43■□□□□ 0.38
CIRBP-245ENST00000621399 EBPLQ9BY08 206 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 TRIM55Q9BYV6 548 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 MED4Q9NPJ6 270 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 RIC8BQ9NVN3 520 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 PNPOQ9NVS9 261 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 HAO1Q9UJM8 370 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 CCDC88CQ9P219 2028 aa17.43■□□□□ 0.38
CIRBP-245ENST00000621399 FASNP49327 2511 aaKnown RBP17.43■□□□□ 0.38
CIRBP-245ENST00000621399 A6NL46 340 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 NPIPB8E9PQR5 432 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 ERVH48-1M5A8F1 160 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 KLF11O14901 512 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 PPP2R1BP30154 601 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 ID2Q02363 134 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 AIMP2Q13155 320 aaKnown RBP17.42■□□□□ 0.38
CIRBP-245ENST00000621399 PDCD2Q16342 344 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-245ENST00000621399 GALNTL6Q49A17 601 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 NOXRED1Q6NXP6 359 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 OR4N5Q8IXE1 308 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 PARP9Q8IXQ6 854 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 LRRC8CQ8TDW0 803 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 ANKRD9Q96BM1 317 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-245ENST00000621399 C19orf60Q96EN9 201 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 C11orf24Q96F05 449 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-245ENST00000621399 LPAR4Q99677 370 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 TUBB6Q9BUF5 446 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 FAIM2Q9BWQ8 316 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 ALOXE3Q9BYJ1 711 aa17.42■□□□□ 0.38
CIRBP-245ENST00000621399 PNO1Q9NRX1 252 aaKnown RBP17.42■□□□□ 0.38
CIRBP-245ENST00000621399 POLR3HQ9Y535 204 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-245ENST00000621399 MYOCOSA0A1B0GUC4 107 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 ATP6AP2A0A1C7CYW4 349 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 SYNDIG1LA6NDD5 238 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 WASHC1A8K0Z3 465 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 A8MUA0 341 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 TGFBR3LH3BV60 316 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 LSM1O15116 133 aaKnown RBP17.41■□□□□ 0.38
CIRBP-245ENST00000621399 PGRMC2O15173 223 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 FGF17O60258 216 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 ATP6AP2O75787 350 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 IFNA16P05015 189 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 FAM87AP0C7U9 286 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 TAS2R50P59544 299 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 OCRLQ01968 901 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 FOLH1Q04609 750 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 SERTAD2Q14140 314 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 KIAA0040Q15053 153 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 XKR7Q5GH72 579 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 OR52E8Q6IFG1 317 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 PAPD4Q6PIY7 484 aaKnown RBP17.41■□□□□ 0.38
CIRBP-245ENST00000621399 GALNT16Q8N428 558 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 C7orf57Q8NEG2 295 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 C16orf78Q8WTQ4 265 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 UCN3Q969E3 161 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 IMMP1LQ96LU5 166 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 PPP3R2Q96LZ3 170 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 C3orf30Q96M34 536 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 WDR77Q9BQA1 342 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-245ENST00000621399 DLGAP4Q9Y2H0 992 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 PCDHA9Q9Y5H5 950 aa17.41■□□□□ 0.38
CIRBP-245ENST00000621399 CLDN16Q9Y5I7 305 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms