RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 TBL3Q12788 808 aaKnown RBP14.07□□□□□ -0.16
UPF1-202ENST00000594243 MFAP5Q13361 173 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 C18orf63Q68DL7 685 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 H3F3CQ6NXT2 135 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 ATG14Q6ZNE5 492 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 LINC00696Q6ZRV3 163 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 CLNKQ7Z7G1 428 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 TMEM132CQ8N3T6 1108 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 SIRT6Q8N6T7 355 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 CHTF18Q8WVB6 975 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 ZNF354BQ96LW1 612 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 KCNA7Q96RP8 456 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 HBEGFQ99075 208 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 EML4Q9HC35 981 aaKnown RBP14.07□□□□□ -0.16
UPF1-202ENST00000594243 ADAP2Q9NPF8 381 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 RRAGDQ9NQL2 400 aaPredicted RBP14.07□□□□□ -0.16
UPF1-202ENST00000594243 PNO1Q9NRX1 252 aaKnown RBP14.07□□□□□ -0.16
UPF1-202ENST00000594243 CLDN16Q9Y5I7 305 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 A0A1W2PR48 441 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 A8MUI8 341 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 ZWINTO95229 277 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 BPGMP07738 259 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 TNNI3P19429 210 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 TPP2P29144 1249 aaPredicted RBP14.06□□□□□ -0.16
UPF1-202ENST00000594243 CASRP41180 1078 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 ETV4P43268 484 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 MAPK12P53778 367 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 FOXA1P55317 472 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 TAS2R50P59544 299 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 ELAVL1Q15717 326 aaKnown RBP14.06□□□□□ -0.16
UPF1-202ENST00000594243 SPIN4Q56A73 249 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 ABHD17BQ5VST6 288 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 PRICKLE2Q7Z3G6 844 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 COMMD6Q7Z4G1 85 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 RBMXL3Q8N7X1 1067 aaKnown RBP14.06□□□□□ -0.16
UPF1-202ENST00000594243 NFAM1Q8NET5 270 aaPredicted RBP14.06□□□□□ -0.16
UPF1-202ENST00000594243 B3GNT7Q8NFL0 401 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 ELP5Q8TE02 316 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 DAZLQ92904 295 aaKnown RBP14.06□□□□□ -0.16
UPF1-202ENST00000594243 ANKRD9Q96BM1 317 aaPredicted RBP14.06□□□□□ -0.16
UPF1-202ENST00000594243 RBM18Q96H35 190 aaKnown RBP14.06□□□□□ -0.16
UPF1-202ENST00000594243 MECRQ9BV79 373 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 ZBTB20Q9HC78 741 aaPredicted RBP14.06□□□□□ -0.16
UPF1-202ENST00000594243 KCNK9Q9NPC2 374 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 ARGLU1Q9NWB6 273 aaPredicted RBP14.06□□□□□ -0.16
UPF1-202ENST00000594243 STMN3Q9NZ72 180 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 B3GNT3Q9Y2A9 372 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 CLCA3PQ9Y6N3 262 aa14.06□□□□□ -0.16
UPF1-202ENST00000594243 DYTNA2CJ06 578 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 TGFBR3LH3BV60 316 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 SLC28A2O43868 658 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 MYO1DO94832 1006 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 CHEK2O96017 543 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 NR2F6P10588 404 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 COX7A2P14406 83 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 SERPINB3P29508 390 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 SOX11P35716 441 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 HTR6P50406 440 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 CLCN2P51788 898 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 TRA2BP62995 288 aaKnown RBP14.05□□□□□ -0.16
UPF1-202ENST00000594243 CASP8Q14790 479 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 MEP1AQ16819 746 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 IMPG1Q17R60 797 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 NADK2Q4G0N4 442 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 TRIM46Q7Z4K8 759 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 CUZD1Q86UP6 607 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 NUDCD3Q8IVD9 361 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 SLC5A8Q8N695 610 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 C1orf52Q8N6N3 182 aaKnown RBP14.05□□□□□ -0.16
UPF1-202ENST00000594243 DNAJB14Q8TBM8 379 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 HAS2Q92819 552 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 PNPLA2Q96AD5 504 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 ZBTB9Q96C00 473 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 DGAT2Q96PD7 388 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 MFRPQ9BY79 579 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 ACPTQ9BZG2 426 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 SHCBP1LQ9BZQ2 653 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 SLAMF7Q9NQ25 335 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 ABI3Q9P2A4 366 aa14.05□□□□□ -0.16
UPF1-202ENST00000594243 PPIEQ9UNP9 301 aaKnown RBP14.05□□□□□ -0.16
UPF1-202ENST00000594243 ZNF462Q96JM2 2506 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 C1orf226A1L170 272 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 CDK2AP1O14519 115 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 AZIN1O14977 448 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 BIRC5O15392 142 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 DYRK3O43781 588 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 FGF17O60258 216 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 GPR75O95800 540 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 AIFM1O95831 613 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 FGF4P08620 206 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 CHN1P15882 459 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 STT3AP46977 705 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 SERPINB4P48594 390 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 ARG2P78540 354 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 IGLV3-21P80748 117 aaPredicted RBP14.04□□□□□ -0.16
UPF1-202ENST00000594243 HMGCS1Q01581 520 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 FOLH1Q04609 750 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 ACSM2AQ08AH3 577 aa14.04□□□□□ -0.16
UPF1-202ENST00000594243 ARL13AQ5H913 290 aaPredicted RBP14.04□□□□□ -0.16
UPF1-202ENST00000594243 SPDYAQ5MJ70 313 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms