RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 MVB12AQ96EY5 273 aa14.09□□□□□ -0.15
NFIX-208ENST00000587260 BTBD10Q9BSF8 475 aa14.09□□□□□ -0.15
NFIX-208ENST00000587260 FAIM2Q9BWQ8 316 aa14.09□□□□□ -0.15
NFIX-208ENST00000587260 ASPSCR1Q9BZE9 553 aa14.09□□□□□ -0.15
NFIX-208ENST00000587260 BHLHE41Q9C0J9 482 aaPredicted RBP14.09□□□□□ -0.15
NFIX-208ENST00000587260 POLR1BQ9H9Y6 1135 aa14.09□□□□□ -0.15
NFIX-208ENST00000587260 ATAD3AQ9NVI7 634 aa14.09□□□□□ -0.15
NFIX-208ENST00000587260 MS4A12Q9NXJ0 267 aa14.09□□□□□ -0.15
NFIX-208ENST00000587260 MAP10Q9P2G4 905 aa14.09□□□□□ -0.15
NFIX-208ENST00000587260 PHF11Q9UIL8 331 aa14.09□□□□□ -0.15
NFIX-208ENST00000587260 DAPP1Q9UN19 280 aa14.09□□□□□ -0.15
NFIX-208ENST00000587260 ATG4BQ9Y4P1 393 aa14.09□□□□□ -0.15
NFIX-208ENST00000587260 SDK2Q58EX2 2172 aa14.09□□□□□ -0.15
NFIX-208ENST00000587260 SCN2AQ99250 2005 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 A0A1W2PR48 441 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 C1orf226A1L170 272 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 H0YIG0 161 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 MRASO14807 208 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 AIM2O14862 343 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 PRKRAO75569 313 aaKnown RBP14.08□□□□□ -0.16
NFIX-208ENST00000587260 STK17BO94768 372 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 KRT16P08779 473 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 HBQ1P09105 142 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 DDX5P17844 614 aaKnown RBP14.08□□□□□ -0.16
NFIX-208ENST00000587260 FBLP22087 321 aaKnown RBP14.08□□□□□ -0.16
NFIX-208ENST00000587260 RORAP35398 523 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 HNRNPFP52597 415 aaKnown RBP14.08□□□□□ -0.16
NFIX-208ENST00000587260 LIM2P55344 173 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 WNT3P56703 355 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 SHC2P98077 582 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 LRRC74AQ0VAA2 488 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 NDUFAF5Q5TEU4 345 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 TMEM164Q5U3C3 297 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 RINLQ6ZS11 566 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 CA13Q8N1Q1 262 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 FAM47BQ8NA70 645 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 GALNT6Q8NCL4 622 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 DNAJB8Q8NHS0 232 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 FBXO27Q8NI29 283 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 COL26A1Q96A83 441 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 GBP5Q96PP8 586 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 OR52E6Q96RD3 313 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 NPAS2Q99743 824 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 MAPKAP1Q9BPZ7 522 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 ZPBPQ9BS86 351 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 DUSP26Q9BV47 211 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 YIPF2Q9BWQ6 316 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 ZNF304Q9HCX3 659 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 FAM120CQ9NX05 1096 aaKnown RBP14.08□□□□□ -0.16
NFIX-208ENST00000587260 TEX10Q9NXF1 929 aaPredicted RBP14.08□□□□□ -0.16
NFIX-208ENST00000587260 NDE1Q9NXR1 346 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 MAN2B2Q9Y2E5 1009 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 PCDHGA8Q9Y5G5 932 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 PCDHA9Q9Y5H5 950 aa14.08□□□□□ -0.16
NFIX-208ENST00000587260 LAMP1P11279 417 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 PAGE3Q5JUK9 113 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 ANXA8L1Q5VT79 327 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 C8orf82Q6P1X6 216 aaPredicted RBP14.07□□□□□ -0.16
NFIX-208ENST00000587260 PRMT9Q6P2P2 845 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 TICAM1Q8IUC6 712 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 MMP21Q8N119 569 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 GTF2H4Q92759 462 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 PPCDCQ96CD2 204 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 PEX11GQ96HA9 241 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 CSF3RQ99062 836 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 MIEF1Q9NQG6 463 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.07□□□□□ -0.16
NFIX-208ENST00000587260 CES1P1Q9UKY3 287 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 PCDHGA3Q9Y5H0 932 aa14.07□□□□□ -0.16
NFIX-208ENST00000587260 PRSS51A0A1B0GVH4 220 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 RNASET2O00584 256 aaKnown RBP14.06□□□□□ -0.16
NFIX-208ENST00000587260 GYG2O15488 501 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 CHST10O43529 356 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 AIFM1O95831 613 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 RBMS1P29558 406 aaKnown RBP14.06□□□□□ -0.16
NFIX-208ENST00000587260 BUD31P41223 144 aaPredicted RBP14.06□□□□□ -0.16
NFIX-208ENST00000587260 FRKP42685 505 aaPredicted RBP14.06□□□□□ -0.16
NFIX-208ENST00000587260 NUDT2P50583 147 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 TNFRSF17Q02223 184 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 ABHD18Q0P651 414 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 ART3Q13508 389 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 DSG2Q14126 1118 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 MAPKAPK3Q16644 382 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 PGS1Q32NB8 556 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 NKAIN1Q4KMZ8 207 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 DNAL1Q4LDG9 190 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 ZNF385BQ569K4 471 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 ZNF385CQ66K41 422 aaPredicted RBP14.06□□□□□ -0.16
NFIX-208ENST00000587260 C18orf63Q68DL7 685 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 OR4F3Q6IEY1 312 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 LCN10Q6JVE6 187 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 MED25Q71SY5 747 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 COX15Q7KZN9 410 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 DSELQ8IZU8 1212 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 VPS37AQ8NEZ2 397 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 KLHL29Q96CT2 875 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 RMND5AQ9H871 391 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 SERHLQ9NQF3 203 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 GID8Q9NWU2 228 aa14.06□□□□□ -0.16
NFIX-208ENST00000587260 SH3BP4Q9P0V3 963 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms