RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 LRRC25Q8N386 305 aaPredicted RBP11.3□□□□□ -0.6
SMIM28-201ENST00000573100 ZNF321PQ8N8H1 164 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 FAM47BQ8NA70 645 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 RNF214Q8ND24 703 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 ZNF592Q92610 1267 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 GAL3ST3Q96A11 431 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 FBXL8Q96CD0 374 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 LINGO1Q96FE5 620 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 Q96MF0 132 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 DACH2Q96NX9 599 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 NDNQ99608 321 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 TRIM5Q9C035 493 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 ZNF703Q9H7S9 590 aaPredicted RBP11.3□□□□□ -0.6
SMIM28-201ENST00000573100 QPCTLQ9NXS2 382 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 ADAM21Q9UKJ8 722 aa11.3□□□□□ -0.6
SMIM28-201ENST00000573100 A0A088AWK7 358 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 C15orf38-AP3S2A0A0A6YYH1 394 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 LRIT2A6NDA9 550 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 C17orf105B2RV13 164 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 KDM4EB2RXH2 506 aaPredicted RBP11.29□□□□□ -0.6
SMIM28-201ENST00000573100 EEF1E1-BLOC1S5C9J1V9 151 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 CYR61O00622 381 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 CASKO14936 926 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 EEF1E1O43324 174 aaKnown RBP11.29□□□□□ -0.6
SMIM28-201ENST00000573100 ERI3O43414 337 aaKnown RBP11.29□□□□□ -0.6
SMIM28-201ENST00000573100 GUCA1CO95843 209 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 ZNF10P21506 573 aaPredicted RBP11.29□□□□□ -0.6
SMIM28-201ENST00000573100 CTSSP25774 331 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 OPRM1P35372 400 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 KCNJ1P48048 391 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 AGFG1P52594 562 aaKnown RBP11.29□□□□□ -0.6
SMIM28-201ENST00000573100 ASPHQ12797 758 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 RCN2Q14257 317 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 EFTUD2Q15029 972 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMIM28-201ENST00000573100 ZNF791Q3KP31 576 aaPredicted RBP11.29□□□□□ -0.6
SMIM28-201ENST00000573100 HSP90AA5PQ58FG0 334 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 PRSS57Q6UWY2 283 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 TMPRSS11BQ86T26 416 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 THOC6Q86W42 341 aaKnown RBP11.29□□□□□ -0.6
SMIM28-201ENST00000573100 KLHDC8AQ8IYD2 350 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 SLC2A12Q8TD20 617 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 SMPDL3BQ92485 455 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 PIGTQ969N2 578 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 MS4A6EQ96DS6 147 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 HSPBAP1Q96EW2 488 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 TIMP4Q99727 224 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 PIP5K1AQ99755 562 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 SH2D2AQ9NP31 389 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 KCNE2Q9Y6J6 123 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 NINQ8N4C6 2090 aa11.29□□□□□ -0.6
SMIM28-201ENST00000573100 H2AFYO75367 372 aaKnown RBP11.28□□□□□ -0.6
SMIM28-201ENST00000573100 PLA2G16P53816 162 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 IL2P60568 153 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 DUSP8Q13202 625 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 KCTD19Q17RG1 926 aaPredicted RBP11.28□□□□□ -0.6
SMIM28-201ENST00000573100 PRAMEF20Q5VT98 475 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 NSUN5P2Q63ZY6 315 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 ADGRD1Q6QNK2 874 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 TXLNBQ8N3L3 684 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 RASGEF1CQ8N431 466 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 PAQR8Q8TEZ7 354 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 CCT6BQ92526 530 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 ISL2Q96A47 359 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 JSRP1Q96MG2 331 aaPredicted RBP11.28□□□□□ -0.6
SMIM28-201ENST00000573100 RUNDC3BQ96NL0 473 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 CNIH4Q9P003 139 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 JKAMPQ9P055 326 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 COPS7AQ9UBW8 275 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 EIF3LQ9Y262 564 aaKnown RBP11.28□□□□□ -0.6
SMIM28-201ENST00000573100 SLC22A14Q9Y267 594 aa11.28□□□□□ -0.6
SMIM28-201ENST00000573100 LRRC3CA6NJW4 275 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 CD8B2A6NJW9 211 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 TRAPPC6AO75865 159 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 IL18BPO95998 194 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 C1QAP02745 245 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 ENO2P09104 434 aaPredicted RBP11.27□□□□□ -0.61
SMIM28-201ENST00000573100 MLNP12872 115 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 HNRNPH1P31943 449 aaKnown RBP11.27□□□□□ -0.61
SMIM28-201ENST00000573100 MAGEA6P43360 314 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 MTTPP55157 894 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 CDKN2DP55273 166 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 LIM2P55344 173 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 CRYZQ08257 329 aaKnown RBP11.27□□□□□ -0.61
SMIM28-201ENST00000573100 SERTAD2Q14140 314 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 TRIP13Q15645 432 aaPredicted RBP11.27□□□□□ -0.61
SMIM28-201ENST00000573100 ANKRD22Q5VYY1 191 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 TMIGD1Q6UXZ0 262 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 YTHDF3Q7Z739 585 aaKnown RBP11.27□□□□□ -0.61
SMIM28-201ENST00000573100 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.27□□□□□ -0.61
SMIM28-201ENST00000573100 PM20D2Q8IYS1 436 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 SLC15A4Q8N697 577 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 TTLQ8NG68 377 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 NUBPLQ8TB37 319 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 SLC22A8Q8TCC7 542 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 ZNF721Q8TF20 911 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 SPACA9Q96E40 222 aaPredicted RBP11.27□□□□□ -0.61
SMIM28-201ENST00000573100 QRFPRQ96P65 431 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 SERINC2Q96SA4 455 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 CSF3RQ99062 836 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms