RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SPG11Q96JI7 2443 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 ENO4A6NNW6 628 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 WASHC1A8K0Z3 465 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 FGF17O60258 216 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 KERAO60938 352 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 ZFAND5O76080 213 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 TGFB1P01137 390 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 POU3F2P20265 443 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 PHBP35232 272 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 SSR4P51571 173 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 CASP6P55212 293 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 IGLV3-21P80748 117 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 PCDH1Q08174 1060 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 ZNF750Q32MQ0 723 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 GRTP1Q5TC63 336 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 CD163Q86VB7 1156 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 OR4N5Q8IXE1 308 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 TMEM156Q8N614 296 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 POGLUT1Q8NBL1 392 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 PSD4Q8NDX1 1056 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 FAM57AQ8TBR7 257 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 PHF10Q8WUB8 498 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 UCN3Q969E3 161 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 TMEM125Q96AQ2 219 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 MTFMTQ96DP5 389 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 GPR78Q96P69 363 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 OR8D2Q9GZM6 311 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 OR51B5Q9H339 312 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 LYRM4Q9HD34 91 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 DMGDHQ9UI17 866 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 YARS2Q9Y2Z4 477 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 LIPGQ9Y5X9 500 aa12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 HRNRQ86YZ3 2850 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-211ENST00000569653 FAM166BA8MTA8 275 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 SUPT3HB4E1H0 165 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 E9PLN8 166 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 CLDN4O14493 209 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 TFECO14948 347 aaPredicted RBP12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 CDC40O60508 579 aaKnown RBP eCLIP12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 SUPT3HO75486 399 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 CLDN14O95500 239 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 MLYCDO95822 493 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 IFNA16P05015 189 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 HIST1H1TP22492 207 aaPredicted RBP12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 SPRP35270 261 aaPredicted RBP12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 PTGER4P35408 488 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 HNRNPH2P55795 449 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 C18orf63Q68DL7 685 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 ADGRD1Q6QNK2 874 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 IL20RBQ6UXL0 311 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 OR2M7Q8NG81 312 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 SLC2A12Q8TD20 617 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 ZNF721Q8TF20 911 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 IFT81Q8WYA0 676 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 SCYL1Q96KG9 808 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 LURAP1Q96LR2 239 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 KCNC2Q96PR1 638 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 FMO2Q99518 471 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 VKORC1Q9BQB6 163 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 DEFB127Q9H1M4 99 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 COPS7BQ9H9Q2 264 aaPredicted RBP12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 CHST11Q9NPF2 352 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 SEMA4BQ9NPR2 832 aaPredicted RBP12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 ARHGAP21Q5T5U3 1957 aa12.83□□□□□ -0.36
GTF3C1-211ENST00000569653 A0A088AWK7 358 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 A0A1W2PS29 197 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 C17orf105B2RV13 164 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 KLRC4-KLRK1H3BQV0 150 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 K7EPI3 171 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 PLPP1O14494 284 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 EEDO75530 441 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 PDE9AO76083 593 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 GLSO94925 669 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 NADKO95544 446 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 IGKV3-11P04433 115 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 C2P06681 752 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 TPOP07202 933 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 CELA3AP09093 270 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 LTA4HP09960 611 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 PCNAP12004 261 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 COX6B1P14854 86 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 ZNF10P21506 573 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 PTGS2P35354 604 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 SMSP52788 366 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 RNF4P78317 190 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 FOXO1Q12778 655 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 DEPDC1Q5TB30 811 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 KHDRBS2Q5VWX1 349 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 GRHL2Q6ISB3 625 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 MED27Q6P2C8 311 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 LYPD8Q6UX82 237 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 HSDL2Q6YN16 418 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 RELL1Q8IUW5 271 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 C9orf40Q8IXQ3 194 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 TMEM132CQ8N3T6 1108 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 MORN4Q8NDC4 146 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 OR14A16Q8NHC5 309 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 HUS1BQ8NHY5 278 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 STAG3L4Q8TBR4 150 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 ASB15Q8WXK1 588 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms