RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 FGF17O60258 216 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 SLC19A2O60779 497 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 RFC3P40938 356 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 CA7P43166 264 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 MEOX1P50221 254 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 HNRNPH2P55795 449 aaKnown RBP16■□□□□ 0.15
CDC42BPB-208ENST00000561271 TNFRSF17Q02223 184 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 RBPJQ06330 500 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 OR4C11Q6IEV9 310 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 OR52B6Q8NGF0 335 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 PTPMT1Q8WUK0 201 aaPredicted RBP16■□□□□ 0.15
CDC42BPB-208ENST00000561271 DAZLQ92904 295 aaKnown RBP16■□□□□ 0.15
CDC42BPB-208ENST00000561271 RGMAQ96B86 450 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 ANKRD9Q96BM1 317 aaPredicted RBP16■□□□□ 0.15
CDC42BPB-208ENST00000561271 PHF21BQ96EK2 531 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 MAGED4Q96JG8 741 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 CENPKQ9BS16 269 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 ZNF717Q9BY31 904 aaPredicted RBP16■□□□□ 0.15
CDC42BPB-208ENST00000561271 VTI1BQ9UEU0 232 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 ADGRE2Q9UHX3 823 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 TINAGQ9UJW2 476 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 NFU1Q9UMS0 254 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 TSC22D4Q9Y3Q8 395 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 PCDHGA11Q9Y5H2 935 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 TNPO3Q9Y5L0 923 aaKnown RBP16■□□□□ 0.15
CDC42BPB-208ENST00000561271 HCFC1P51610 2035 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 A0A087WUV0 522 aaPredicted RBP15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 EXOC1LA0A1B0GW35 172 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 SYNDIG1LA6NDD5 238 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 TMEM200CA6NKL6 621 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 H0YIV9 168 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 KIF2AO00139 706 aaPredicted RBP15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 CCL21O00585 134 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 CDK2AP1O14519 115 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 OR7A17O14581 309 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 ZNHIT1O43257 154 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 UGDHO60701 494 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 OR2J2O76002 312 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 KRT38O76015 456 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 ZFAND5O76080 213 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 ETHE1O95571 254 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 MLYCDO95822 493 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 SSR4P51571 173 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 PHEXP78562 749 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 HSF1Q00613 529 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 SLAMF1Q13291 335 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 SERTAD2Q14140 314 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 C18orf63Q68DL7 685 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 OR4N5Q8IXE1 308 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 L3MBTL4Q8NA19 623 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 MORN4Q8NDC4 146 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 SLC2A12Q8TD20 617 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 REPS1Q96D71 796 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 CCDC120Q96HB5 630 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 NSUN5Q96P11 429 aaKnown RBP15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 NOL11Q9H8H0 719 aaKnown RBP15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 PHF11Q9UIL8 331 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 ZNF180Q9UJW8 692 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 PCTPQ9UKL6 214 aa15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 KLF13Q9Y2Y9 288 aaPredicted RBP15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 INTS1Q8N201 2190 aaKnown RBP15.99■□□□□ 0.15
CDC42BPB-208ENST00000561271 WWP2O00308 870 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 SMIM24O75264 130 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 EEDO75530 441 aaKnown RBP15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 RBP1P09455 135 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 TNNI3P19429 210 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 NEK2P51955 445 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 HK2P52789 917 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 GPR85P60893 370 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 IGLV3-21P80748 117 aaPredicted RBP15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 TRAF3Q13114 568 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 C3AR1Q16581 482 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 TSNAXIP1Q2TAA8 658 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 HSDL2Q6YN16 418 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 RPS27LQ71UM5 84 aaKnown RBP15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 MDGA2Q7Z553 956 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 GPR180Q86V85 440 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 ZCCHC7Q8N3Z6 543 aaKnown RBP15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 KIF18AQ8NI77 898 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 WDR20Q8TBZ3 569 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 ASB15Q8WXK1 588 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 RPF2Q9H7B2 306 aaKnown RBP15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 SUCOQ9UBS9 1254 aaKnown RBP15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 ERVK-11Q9UQG0 969 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 YARS2Q9Y2Z4 477 aaKnown RBP15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 ATG4BQ9Y4P1 393 aa15.98■□□□□ 0.15
CDC42BPB-208ENST00000561271 A0A0A6YYD5 115 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 STX16-NPEPL1H3BU86 382 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 STX16O14662 325 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 TFECO14948 347 aaPredicted RBP15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 TMPRSS11DO60235 418 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 OR6B1O95007 311 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 CLDN9O95484 217 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 CNTFP26441 200 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 BSGP35613 385 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 SOX3P41225 446 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 CCNG1P51959 295 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 FOLH1Q04609 750 aa15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.97■□□□□ 0.15
CDC42BPB-208ENST00000561271 KRTCAP3Q53RY4 240 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms