RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 RAD54L2Q9Y4B4 1467 aa3.65□□□□□ -1.83
EFCAB11-213ENST00000557685 RPGRIP1LQ68CZ1 1315 aa3.65□□□□□ -1.83
EFCAB11-213ENST00000557685 IGHV3-38A0A0C4DH36 116 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 SHISA7A6NL88 538 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 DCXO43602 365 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 SEC22BO75396 215 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 CSDE1O75534 798 aaKnown RBP3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 TRIM49P0CI25 452 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 TRIM49CP0CI26 452 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 GPX3P22352 226 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 FCGR2BP31994 310 aaPredicted RBP3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 FCGR2CP31995 323 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 ZFP36L2P47974 494 aaKnown RBP3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 LUMP51884 338 aaPredicted RBP3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 HNRNPFP52597 415 aaKnown RBP3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 ABCE1P61221 599 aaKnown RBP3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 HERV-K104P63124 156 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 RBBP4Q09028 425 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 WASHC5Q12768 1159 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 NFATC2Q13469 925 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 KIAA0141Q14154 515 aaPredicted RBP3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 KRT31Q15323 416 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 MLF2Q15773 248 aaPredicted RBP3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 PKN2Q16513 984 aaKnown RBP3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 EPC2Q52LR7 807 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 MPPE1Q53F39 396 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 C1orf189Q5VU69 101 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 ZNF613Q6PF04 617 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 GDPGP1Q6ZNW5 385 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 TBC1D10CQ8IV04 446 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 BATF2Q8N1L9 274 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 CCNYQ8ND76 341 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 PRSS33Q8NF86 280 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 TMEM185AQ8NFB2 350 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 OR6M1Q8NGM8 313 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 OR6F1Q8NGZ6 308 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 C11orf45Q8TAV5 145 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 SLC13A3Q8WWT9 602 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 LIPHQ8WWY8 451 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 C11orf52Q96A22 123 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 MOCOSQ96EN8 888 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 TMEM237Q96Q45 408 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 DDX47Q9H0S4 455 aaKnown RBP3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 ABCG8Q9H221 673 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 CARD9Q9H257 536 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 SLC26A1Q9H2B4 701 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 PARLQ9H300 379 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 KCNN3Q9UGI6 736 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 RNF215Q9Y6U7 377 aa3.64□□□□□ -1.83
EFCAB11-213ENST00000557685 IGHV4-30-2A0A087WSY4 118 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 OR5H15A6NDH6 313 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 YJEFN3A6XGL0 299 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 EEF2KO00418 725 aaKnown RBP3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 B4GAT1O43505 415 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 IDH3BO43837 385 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 KIAA0513O60268 411 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 OR6A2O95222 327 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 APRTP07741 180 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 TPBGLP0DKB5 382 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 SELEP16581 610 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 CLK1P49759 484 aaKnown RBP3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 SRP54P61011 504 aaKnown RBP3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 SSTP61278 116 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 LY6DQ14210 128 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 UPP1Q16831 310 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 HERC4Q5GLZ8 1057 aaPredicted RBP3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 PRAMEF7Q5VXH5 474 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 NKAIN2Q5VXU1 208 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 HIST2H2AA3Q6FI13 130 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 NEK5Q6P3R8 708 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 CNSTQ6PJW8 725 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 ADAMTSL2Q86TH1 951 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 ZNF619Q8N2I2 560 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 GVQW1Q8N7I0 195 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 SPPL2AQ8TCT8 520 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 TMEM186Q96B77 213 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 MRPL53Q96EL3 112 aaKnown RBP3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 PCED1BQ96HM7 432 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 RPGRIP1Q96KN7 1286 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 CXorf58Q96LI9 332 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 AGAP3Q96P47 875 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 RAB40CQ96S21 281 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 WWP1Q9H0M0 922 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 ABCG4Q9H172 646 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 SYTL2Q9HCH5 934 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 IL1RAPQ9NPH3 570 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 GDF3Q9NR23 364 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 TECRQ9NZ01 308 aaKnown RBP3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 VPS54Q9P1Q0 977 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 MRTO4Q9UKD2 239 aaKnown RBP3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 DNPEPQ9ULA0 475 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 CCPG1Q9ULG6 757 aa3.63□□□□□ -1.83
EFCAB11-213ENST00000557685 RNF103-CHMP3A0A140T963 221 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 BICDL2A1A5D9 508 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 CCDC69A6NI79 296 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 H7C423 109 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 SOCS3O14543 225 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms