RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	TBR1	Q16650	682 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	DEFB134	Q4QY38	66 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	PWWP2B	Q6NUJ5	590 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	CEACAM20	Q6UY09	585 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	TRPM8	Q7Z2W7	1104 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	CAMKMT	Q7Z624	323 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	GPR180	Q86V85	440 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	DTX1	Q86Y01	620 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	FUNDC1	Q8IVP5	155 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	NATD1	Q8N6N6	113 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	TESC	Q96BS2	214 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	COQ8B	Q96D53	544 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	TUBB6	Q9BUF5	446 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	DDA1	Q9BW61	102 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	ASPSCR1	Q9BZE9	553 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	DPY30	Q9C005	99 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	COPS7B	Q9H9Q2	264 aa	Predicted RBP	10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	EHD3	Q9NZN3	535 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	BAIAP2L1	Q9UHR4	511 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	ATP6V1H	Q9UI12	483 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	PHF11	Q9UIL8	331 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	DAPP1	Q9UN19	280 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	EXO1	Q9UQ84	846 aa	Known RBP	10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	NAALAD2	Q9Y3Q0	740 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907	B3GALT1	Q9Y5Z6	326 aa		10.68	□□□□□ -0.7
RAD51B-222	ENST00000555907		A0A1B0GX78	115 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907		A0A1W2PR48	441 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	FAM234B	A2RU67	622 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	BLACE	A4D250	179 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	SCRG1	O75711	98 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	GBA	P04062	536 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	DDX5	P17844	614 aa	Known RBP	10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	WT1	P19544	449 aa	Predicted RBP	10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	CERS1	P27544	350 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	ZFP36L2	P47974	494 aa	Known RBP	10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	LIM2	P55344	173 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	TAS2R50	P59544	299 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	UFM1	P61960	85 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	SRSF11	Q05519	484 aa	Known RBP	10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	KLC1	Q07866	573 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	C2orf80	Q0P641	193 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	PDE7A	Q13946	482 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	PTGR1	Q14914	329 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	IGFBP7	Q16270	282 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	DPY19L1	Q2PZI1	675 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	DCAF12	Q5T6F0	453 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	HIST2H2BC	Q6DN03	193 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	PAOX	Q6QHF9	649 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	BLOC1S3	Q6QNY0	202 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	TTLL10	Q6ZVT0	673 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	R3HCC1L	Q7Z5L2	792 aa	Known RBP	10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	TMEM132C	Q8N3T6	1108 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	C7orf57	Q8NEG2	295 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	OR9A4	Q8NGU2	314 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	ZCCHC10	Q8TBK6	192 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	ADAMTS18	Q8TE60	1221 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	EGLN2	Q96KS0	407 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	MARK4	Q96L34	752 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	TSSK3	Q96PN8	268 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	GBP5	Q96PP8	586 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	PRPF18	Q99633	342 aa	Known RBP	10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	DPH2	Q9BQC3	489 aa	Predicted RBP	10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	FAIM2	Q9BWQ8	316 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	EBPL	Q9BY08	206 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	SPRY4	Q9C004	299 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	REEP4	Q9H6H4	257 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	ACTR5	Q9H9F9	607 aa	Predicted RBP	10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	APMAP	Q9HDC9	416 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	SLC52A3	Q9NQ40	469 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	IRAK4	Q9NWZ3	460 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	G3BP2	Q9UN86	482 aa	Known RBP	10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	ATG4B	Q9Y4P1	393 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	PCDHA9	Q9Y5H5	950 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907	CAPN7	Q9Y6W3	813 aa		10.67	□□□□□ -0.7
RAD51B-222	ENST00000555907		A0A0A6YYC8	382 aa	Predicted RBP	10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907		A0A0G2JN53	185 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	C1orf226	A1L170	272 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	GABRR3	A8MPY1	467 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907		I3L1I5	382 aa	Predicted RBP	10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	SGK494	L7N484	410 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	CYR61	O00622	381 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	CHST10	O43529	356 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	RRP9	O43818	475 aa	Known RBP	10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	DNAJB6	O75190	326 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	B3GALT4	O96024	378 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	IL6	P05231	212 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	FURIN	P09958	794 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	PIM1	P11309	404 aa	Predicted RBP	10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	RNH1	P13489	461 aa	Known RBP	10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	IL1RN	P18510	177 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	DDC	P20711	480 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	PIK3R1	P27986	724 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	IL12A	P29459	219 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	TLX1	P31314	330 aa	Predicted RBP	10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	RORA	P35398	523 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	POLR2J	P52435	117 aa	Known RBP	10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	HNRNPH2	P55795	449 aa	Known RBP	10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	RAB38	P57729	211 aa		10.66	□□□□□ -0.7
RAD51B-222	ENST00000555907	DSG2	Q14126	1118 aa		10.66	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms