RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CGB2Q6NT52 195 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 SBSNQ6UWP8 590 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 RPTNQ6XPR3 784 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 GALNTL5Q7Z4T8 443 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 FGD2Q7Z6J4 655 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 HOMEZQ8IX15 550 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 ANKRD53Q8N9V6 530 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 NT5CQ8TCD5 201 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 ELP5Q8TE02 316 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 THAP3Q8WTV1 239 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-215ENST00000554656 NEIL2Q969S2 332 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 TBC1D20Q96BZ9 403 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 L3HYPDHQ96EM0 354 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 LPAR4Q99677 370 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 UTP23Q9BRU9 249 aaKnown RBP9.9□□□□□ -0.82
SHMT2-215ENST00000554656 HAUS8Q9BT25 410 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 GATA5Q9BWX5 397 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-215ENST00000554656 ARL15Q9NXU5 204 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 CPSF2Q9P2I0 782 aaKnown RBP9.9□□□□□ -0.82
SHMT2-215ENST00000554656 USH1CQ9Y6N9 552 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF407Q9C0G0 2248 aa9.9□□□□□ -0.83
SHMT2-215ENST00000554656 HIVEP1P15822 2718 aa9.9□□□□□ -0.83
SHMT2-215ENST00000554656 IGKV3D-11A0A0A0MRZ8 115 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 A8MT66 165 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 NPIPA5E9PKD4 350 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 SLCO1B7G3V0H7 640 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 STX16-NPEPL1H3BU86 382 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 STX16O14662 325 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 KLK8O60259 260 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 B4GALT2O60909 372 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 SP1P08047 785 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 ALOX12P18054 663 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 IL10P22301 178 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 ELAVL4P26378 380 aaKnown RBP9.89□□□□□ -0.83
SHMT2-215ENST00000554656 TPP2P29144 1249 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-215ENST00000554656 GRK3P35626 688 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 SCTRP47872 440 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 AP1S2P56377 157 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 REEP5Q00765 189 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 ALDH6A1Q02252 535 aaKnown RBP9.89□□□□□ -0.83
SHMT2-215ENST00000554656 RBPJQ06330 500 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 ACTN3Q08043 901 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-215ENST00000554656 PWP1Q13610 501 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 PPP1R3AQ16821 1122 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 METTL2BQ6P1Q9 378 aaKnown RBP9.89□□□□□ -0.83
SHMT2-215ENST00000554656 C6orf89Q6UWU4 347 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-215ENST00000554656 SPPL2CQ8IUH8 684 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 WDR75Q8IWA0 830 aaKnown RBP9.89□□□□□ -0.83
SHMT2-215ENST00000554656 ZNF295-AS1Q8N0V1 137 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 LGI4Q8N135 537 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 SLC5A8Q8N695 610 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 NFAM1Q8NET5 270 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-215ENST00000554656 PIWIL2Q8TC59 973 aaKnown RBP9.89□□□□□ -0.83
SHMT2-215ENST00000554656 UTP15Q8TED0 518 aaKnown RBP9.89□□□□□ -0.83
SHMT2-215ENST00000554656 MAGED4Q96JG8 741 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 C1QTNF3Q9BXJ4 246 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 SLC6A16Q9GZN6 736 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 KLHL31Q9H511 634 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 RABEP2Q9H5N1 569 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 CDCP1Q9H5V8 836 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 ALG9Q9H6U8 611 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 NECTIN3Q9NQS3 549 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 NUDT4Q9NZJ9 180 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 NPIPA1Q9UND3 350 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 RAP2CQ9Y3L5 183 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 HCFC1P51610 2035 aa9.89□□□□□ -0.83
SHMT2-215ENST00000554656 SAGE2PA6NJ88 616 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 TGFBR3LH3BV60 316 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 ADAM10O14672 748 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 NME2P1O60361 137 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 SLC25A12O75746 678 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 GUCA1CO95843 209 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 SERPIND1P05546 499 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 ENO2P09104 434 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-215ENST00000554656 SMIM10L1P0DMW3 83 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 CD46P15529 392 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 ALOX15P16050 662 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-215ENST00000554656 IMPDH1P20839 514 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 MAOAP21397 527 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 NME2P22392 152 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 EEF1DP29692 281 aaKnown RBP9.88□□□□□ -0.83
SHMT2-215ENST00000554656 PTGER4P35408 488 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 KIR3DL1P43629 444 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 MLF1P58340 268 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 RAB8AP61006 207 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 OC90Q02509 493 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-215ENST00000554656 SPDYAQ5MJ70 313 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 CES4AQ5XG92 561 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 MTFR2Q6P444 385 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 XKRXQ6PP77 449 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 QSOX2Q6ZRP7 698 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 ZCCHC23Q6ZST2 131 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 GDF7Q7Z4P5 450 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 YTHDF3Q7Z739 585 aaKnown RBP9.88□□□□□ -0.83
SHMT2-215ENST00000554656 RPS19BP1Q86WX3 136 aaKnown RBP9.88□□□□□ -0.83
SHMT2-215ENST00000554656 CPSF7Q8N684 471 aaKnown RBP9.88□□□□□ -0.83
SHMT2-215ENST00000554656 GBP7Q8N8V2 638 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-215ENST00000554656 TMEM178AQ8NBL3 297 aa9.88□□□□□ -0.83
SHMT2-215ENST00000554656 C10orf82Q8WW14 230 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms