RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 RFXANKO14593 260 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 WNT9AO14904 365 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 PSIP1O75475 530 aaKnown RBP11.7□□□□□ -0.54
SHMT2-207ENST00000553837 HSMCR30P0CW71 290 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 PDHA2P29803 388 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 GZMKP49863 264 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 AP1S2P56377 157 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 DCDC1P59894 354 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 IRF8Q02556 426 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 MTAPQ13126 283 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 DDX39BQ13838 428 aaKnown RBP11.7□□□□□ -0.54
SHMT2-207ENST00000553837 EFR3AQ14156 821 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 DOC2AQ14183 400 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 GRIN2CQ14957 1233 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 BAK1Q16611 211 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 ZNF367Q7RTV3 350 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 CLECL1Q8IZS7 167 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 TMEM132CQ8N3T6 1108 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 TRAM1L1Q8N609 369 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 TTLQ8NG68 377 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 ASZ1Q8WWH4 475 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 SAMD11Q96NU1 681 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 REEP1Q9H902 201 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 ZNF556Q9HAH1 456 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 TIGARQ9NQ88 270 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 STOX2Q9P2F5 926 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-207ENST00000553837 GULP1Q9UBP9 304 aa11.7□□□□□ -0.54
SHMT2-207ENST00000553837 MTCL1Q9Y4B5 1905 aaKnown RBP11.7□□□□□ -0.54
SHMT2-207ENST00000553837 TSPAN11A1L157 253 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 SERTM1A2A2V5 107 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 ATP6V1G2-DDX39BF2Z307 99 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 OR7A10O76100 309 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 VIPP01282 170 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 STSP08842 583 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 CYP2A6P11509 494 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 GGT2P36268 569 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 TALDO1P37837 337 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 RECQLP46063 649 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 RAE1P78406 368 aaKnown RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 POU6F2P78424 691 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 HTRA4P83105 476 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 ABHD18Q0P651 414 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 HYAL2Q12891 473 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 NAE1Q13564 534 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 XKR6Q5GH73 641 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 CLVS2Q5SYC1 327 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 C19orf48Q6RUI8 117 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 ZNF605Q86T29 641 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 C12orf40Q86WS4 652 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 C9orf43Q8TAL5 461 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 UBASH3BQ8TF42 649 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 BTN2A2Q8WVV5 523 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 ING5Q8WYH8 240 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 HERVK_113Q902F9 699 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 CLP1Q92989 425 aaKnown RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 SH3KBP1Q96B97 665 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 C11orf24Q96F05 449 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 BEX2Q9BXY8 128 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 GABARAPL3Q9BY60 117 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 RNF121Q9H920 327 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 AMBNQ9NP70 447 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 WASH6PQ9NQA3 447 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 B3GNT2Q9NY97 397 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 CXXC1Q9P0U4 656 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 RPS6KA6Q9UK32 745 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 V9GYH0 126 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 A0A1W2PQ09 198 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 LEUTXA8MZ59 168 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 B4DXG7 233 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 SPINT1O43278 529 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 TRIM3O75382 744 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 PTHP01270 115 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 C1QBP02746 253 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 LAMP1P11279 417 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 UQCRC1P31930 480 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 CSTF2P33240 577 aaKnown RBP eCLIP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 KIR3DL1P43629 444 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 DAB2P98082 770 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 FAM214AQ32MH5 1076 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 TCEAL5Q5H9L2 206 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 C10orf62Q5T681 223 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 ZNF697Q5TEC3 545 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 AGTRAPQ6RW13 159 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 GPR155Q7Z3F1 870 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 HDDC2Q7Z4H3 204 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 AMIGO1Q86WK6 493 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 SYT12Q8IV01 421 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 YIPF7Q8N8F6 280 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 MRPL43Q8N983 215 aaKnown RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 MED8Q96G25 268 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 TMEM80Q96HE8 168 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 PKP4Q99569 1192 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 DPH2Q9BQC3 489 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 FAM83CQ9BQN1 747 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 TRAF4Q9BUZ4 470 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 UCK2Q9BZX2 261 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 SRRQ9GZT4 340 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 IFT22Q9H7X7 185 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 SPATA6Q9NWH7 488 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-207ENST00000553837 THUMPD1Q9NXG2 353 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms