RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 THAP10Q9P2Z0 257 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-205ENST00000553474 XIRP2A4UGR9 3374 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 TRPM6Q9BX84 2022 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 PRUNE2Q8WUY3 3088 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 TRBC2A0A5B9 178 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 TMEM247A6NEH6 219 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 EFCAB10A6NFE3 127 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 OPN1SWP03999 348 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 SLC35G4P0C7Q5 338 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 CBLP22681 906 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 TGFBR2P37173 567 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 VIPR2P41587 438 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 ALDH9A1P49189 494 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 MANFP55145 182 aaKnown RBP12.29□□□□□ -0.44
SHMT2-205ENST00000553474 MLLT10P55197 1068 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 SMIM11AP58511 58 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 MEF2AQ02078 507 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-205ENST00000553474 FAM78AQ5JUQ0 283 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 CEACAM20Q6UY09 585 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 NUDT18Q6ZVK8 323 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 IGFN1Q86VF2 1251 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 CENPSQ8N2Z9 138 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 ZNF740Q8NDX6 193 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 RGMAQ96B86 450 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 TM4SF18Q96CE8 201 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 ZNF607Q96SK3 696 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 S1PR5Q9H228 398 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 CORINQ9Y5Q5 1042 aa12.29□□□□□ -0.44
SHMT2-205ENST00000553474 EFCAB9A8MZ26 197 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 CLEC3AO75596 197 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 NADKO95544 446 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 ADAP00813 363 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 HNRNPCP07910 306 aaKnown RBP eCLIP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 DRD2P14416 443 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 PCBP4P57723 403 aaKnown RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 DGCR6Q14129 220 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TMEM35AQ53FP2 167 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 PIP5KL1Q5T9C9 394 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TUBA3EQ6PEY2 450 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 PLD3Q8IV08 490 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 MMAAQ8IVH4 418 aaKnown RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 SLC44A2Q8IWA5 706 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TAGAPQ8N103 731 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 OR6Q1Q8NGQ2 317 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 APOBEC4Q8WW27 367 aaKnown RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 PROX1Q92786 737 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 ZHX1-C8orf76Q96EF9 292 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TEFMQ96QE5 360 aaKnown RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 MYOCQ99972 504 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 MENTQ9BUN1 341 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TEX101Q9BY14 249 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 MROQ9BYG7 248 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 RACGAP1Q9H0H5 632 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 MMP27Q9H306 513 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 CXorf36Q9H7Y0 433 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 DDX31Q9H8H2 851 aaKnown RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 PRSS16Q9NQE7 514 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 PRDM6Q9NQX0 595 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TMEM184CQ9NVA4 438 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 RHBDL2Q9NX52 303 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TAC3Q9UHF0 121 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 OSGIN1Q9UJX0 560 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 ACSL6Q9UKU0 697 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 RAB23Q9ULC3 237 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 SH3GLB1Q9Y371 365 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 DGKBQ9Y6T7 804 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 HEATR5BQ9P2D3 2071 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 PRAMEF33A0A0G2JMD5 474 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TBC1D3BA6NDS4 549 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 PRAMEF25A6NGN4 478 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 PRAMEF10O60809 474 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TBX6O95947 436 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 ALOX5P09917 674 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 PIPP12273 146 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 CTSKP43235 329 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 OR1E2P47887 323 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 ANXA11P50995 505 aaKnown RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TBC1D25Q3MII6 688 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TIMM50Q3ZCQ8 353 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 USP43Q70EL4 1123 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 LINC00471Q8N535 108 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 ANKRD53Q8N9V6 530 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 ST13P5Q8NFI4 369 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 OR5AK3PQ8NH89 298 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 NDNFQ8TB73 568 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 GGHQ92820 318 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 DHRS1Q96LJ7 313 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 IL17FQ96PD4 163 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 ALPK1Q96QP1 1244 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 NIPSNAP1Q9BPW8 284 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 CDCA4Q9BXL8 241 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 RMI1Q9H9A7 625 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 NDOR1Q9UHB4 597 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TMCC3Q9ULS5 477 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 MGAT4BQ9UQ53 548 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 TDRKHQ9Y2W6 561 aaKnown RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-205ENST00000553474 KLK4Q9Y5K2 254 aa12.28□□□□□ -0.44
SHMT2-205ENST00000553474 DSPPQ9NZW4 1301 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms