RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ENO4A6NNW6 628 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 GABRR3A8MPY1 467 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 MAGEB17A8MXT2 336 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 CLGNO14967 610 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 ITM2AO43736 263 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 GALR3O60755 368 aaPredicted RBP12.57□□□□□ -0.4
NUP188-211ENST00000550219 ESRRBO95718 433 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 OTCP00480 354 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 FHP07954 510 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 C1GALT1C1LP0DN25 315 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 NEFHP12036 1026 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 ALOX12P18054 663 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 TSPAN8P19075 237 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 JAK1P23458 1154 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 CA7P43166 264 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 SLC1A6P48664 564 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 CCNG1P51959 295 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 PKNOX1P55347 436 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 SLC26A5P58743 744 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 ABCE1P61221 599 aaKnown RBP12.57□□□□□ -0.4
NUP188-211ENST00000550219 CHIT1Q13231 466 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 GGTA1PQ4G0N0 100 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 LIPJQ5W064 366 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 SLC34A3Q8N130 599 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 KIF2BQ8N4N8 673 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 SLC5A8Q8N695 610 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 M1APQ8TC57 530 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 AGAP11Q8TF27 550 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 DYDC1Q8WWB3 177 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 RELTQ969Z4 430 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 TBC1D20Q96BZ9 403 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 MAGED4Q96JG8 741 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 OR1F2PQ96R84 312 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 NPAS2Q99743 824 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 SARGQ9BW04 601 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 C20orf27Q9GZN8 174 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 PITHD1Q9GZP4 211 aaPredicted RBP12.57□□□□□ -0.4
NUP188-211ENST00000550219 RHBGQ9H310 441 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 MMP25Q9NPA2 562 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 THAP1Q9NVV9 213 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 ENTPD4Q9Y227 616 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.57□□□□□ -0.4
NUP188-211ENST00000550219 CHST10O43529 356 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 SLC19A2O60779 497 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 DNAJB6O75190 326 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 WISP2O76076 250 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 CLDN9O95484 217 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 CHRNGP07510 517 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 FGF4P08620 206 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 PRF1P14222 555 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 CD46P15529 392 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 CD22P20273 847 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 GRNP28799 593 aaKnown RBP12.56□□□□□ -0.4
NUP188-211ENST00000550219 CD96P40200 585 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 CASP6P55212 293 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 RAB8AP61006 207 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 SKP1P63208 163 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 REEP5Q00765 189 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 OCRLQ01968 901 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 GUCY1A3Q02108 690 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 ALDH6A1Q02252 535 aaKnown RBP12.56□□□□□ -0.4
NUP188-211ENST00000550219 IRF8Q02556 426 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 DOC2AQ14183 400 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 RBBP5Q15291 538 aaKnown RBP12.56□□□□□ -0.4
NUP188-211ENST00000550219 SP5Q6BEB4 398 aaPredicted RBP12.56□□□□□ -0.4
NUP188-211ENST00000550219 SPINK14Q6IE38 97 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 GRHL2Q6ISB3 625 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 H3F3CQ6NXT2 135 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 LETMD1Q6P1Q0 360 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 GPRIN3Q6ZVF9 776 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 ABHD13Q7L211 337 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 MILR1Q7Z6M3 343 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 TICAM1Q8IUC6 712 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 MDS2Q8NDY4 140 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 OR4F6Q8NGB9 312 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 LRRC8CQ8TDW0 803 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 ITLN2Q8WWU7 325 aaPredicted RBP12.56□□□□□ -0.4
NUP188-211ENST00000550219 PTCD3Q96EY7 689 aaKnown RBP12.56□□□□□ -0.4
NUP188-211ENST00000550219 SORT1Q99523 831 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 EFCAB11Q9BUY7 163 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 CDCP1Q9H5V8 836 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 NT5DC2Q9H857 520 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 ZNF395Q9H8N7 513 aaPredicted RBP12.56□□□□□ -0.4
NUP188-211ENST00000550219 EML4Q9HC35 981 aaKnown RBP12.56□□□□□ -0.4
NUP188-211ENST00000550219 TINAGQ9UJW2 476 aa12.56□□□□□ -0.4
NUP188-211ENST00000550219 SCN3AQ9NY46 2000 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 PSMD12O00232 456 aaPredicted RBP12.55□□□□□ -0.4
NUP188-211ENST00000550219 LYPLA1O75608 230 aaPredicted RBP12.55□□□□□ -0.4
NUP188-211ENST00000550219 SNRPB2P08579 225 aaKnown RBP12.55□□□□□ -0.4
NUP188-211ENST00000550219 IL10P22301 178 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 SCTRP47872 440 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 LAPTM5Q13571 262 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 PWP1Q13610 501 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 C3AR1Q16581 482 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 XKR6Q5GH73 641 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 TOR1AIP1Q5JTV8 583 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 GALNTL5Q7Z4T8 443 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 MRGPRGQ86SM5 289 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 AFAP1L2Q8N4X5 818 aa12.55□□□□□ -0.4
NUP188-211ENST00000550219 TMEM178AQ8NBL3 297 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms