RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 REP15Q6BDI9 236 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 OR4F3Q6IEY1 312 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 OR52E8Q6IFG1 317 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 ADAMTS14Q8WXS8 1223 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 RCN3Q96D15 328 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 RNF31Q96EP0 1072 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 RTKNQ9BST9 563 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 ASPSCR1Q9BZE9 553 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 FAM120CQ9NX05 1096 aaKnown RBP27.13■■□□□ 1.93
BRF1-213ENST00000548421 TAS2R7Q9NYW3 318 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 C5AR2Q9P296 337 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 LEF1Q9UJU2 399 aaPredicted RBP27.13■■□□□ 1.93
BRF1-213ENST00000548421 UTS2RQ9UKP6 389 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 CES1P1Q9UKY3 287 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 A0A1W2PNU3 283 aaPredicted RBP27.13■■□□□ 1.93
BRF1-213ENST00000548421 ASPDHA6ND91 283 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 FBP2O00757 339 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 PGRMC2O15173 223 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 ATP5HO75947 161 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 UNC5CO95185 931 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 PHC1P78364 1004 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 TLR1Q15399 786 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 C3orf38Q5JPI3 329 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 SHISA5Q8N114 240 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 NATD1Q8N6N6 113 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 EXOSC8Q96B26 276 aaKnown RBP27.13■■□□□ 1.93
BRF1-213ENST00000548421 ULBP3Q9BZM4 244 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 SATB2Q9UPW6 733 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 MRPS33Q9Y291 106 aaKnown RBP27.13■■□□□ 1.93
BRF1-213ENST00000548421 B3GALT1Q9Y5Z6 326 aa27.13■■□□□ 1.93
BRF1-213ENST00000548421 WDFY3Q8IZQ1 3526 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 BLACEA4D250 179 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 PMS2P1A4D2B8 440 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 KIAA0754O94854 1291 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 RORAP35398 523 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 MAPKAPK3Q16644 382 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 PRSS53Q2L4Q9 553 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 ANXA8L1Q5VT79 327 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 YTHDF3Q7Z739 585 aaKnown RBP27.12■■□□□ 1.93
BRF1-213ENST00000548421 GALNT15Q8N3T1 639 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 DNAJB14Q8TBM8 379 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 TBC1D20Q96BZ9 403 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 NPAS2Q99743 824 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 RMND5AQ9H871 391 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 EFCAB1Q9HAE3 211 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 PSME2Q9UL46 239 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 NUP210LQ5VU65 1888 aa27.12■■□□□ 1.93
BRF1-213ENST00000548421 ERICH4A6NGS2 130 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 FAM227AF5H4B4 570 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 HNRNPCL1O60812 293 aaKnown RBP27.11■■□□□ 1.93
BRF1-213ENST00000548421 ZNF28P17035 718 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 XCR1P46094 333 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 WNT3P56703 355 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 DCDP81605 110 aaKnown RBP27.11■■□□□ 1.93
BRF1-213ENST00000548421 NKAIN1Q4KMZ8 207 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 ZNF385CQ66K41 422 aaPredicted RBP27.11■■□□□ 1.93
BRF1-213ENST00000548421 RETREG3Q86VR2 466 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 PCYOX1LQ8NBM8 494 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 VPS37AQ8NEZ2 397 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 TANKQ92844 425 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 KLHL29Q96CT2 875 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 LRFN5Q96NI6 719 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 YIPF2Q9BWQ6 316 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 RBCK1Q9BYM8 510 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 SLC35C2Q9NQQ7 365 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 TRPC4Q9UBN4 977 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 PCDHGA3Q9Y5H0 932 aa27.11■■□□□ 1.93
BRF1-213ENST00000548421 MRASO14807 208 aa27.1■■□□□ 1.93
BRF1-213ENST00000548421 AIM2O14862 343 aa27.1■■□□□ 1.93
BRF1-213ENST00000548421 PDPK1O15530 556 aa27.1■■□□□ 1.93
BRF1-213ENST00000548421 FHP07954 510 aa27.1■■□□□ 1.93
BRF1-213ENST00000548421 HNRNPFP52597 415 aaKnown RBP27.1■■□□□ 1.93
BRF1-213ENST00000548421 MPEG1Q2M385 716 aa27.1■■□□□ 1.93
BRF1-213ENST00000548421 SLC2A7Q6PXP3 512 aa27.1■■□□□ 1.93
BRF1-213ENST00000548421 TMEM52Q8NDY8 209 aa27.1■■□□□ 1.93
BRF1-213ENST00000548421 CIDECQ96AQ7 238 aaPredicted RBP27.1■■□□□ 1.93
BRF1-213ENST00000548421 OR1F2PQ96R84 312 aa27.1■■□□□ 1.93
BRF1-213ENST00000548421 PRSS51A0A1B0GVH4 220 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 FAM149AA5PLN7 773 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 WASHC1A8K0Z3 465 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 RNASET2O00584 256 aaKnown RBP27.09■■□□□ 1.93
BRF1-213ENST00000548421 SCN2BO60939 215 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 ONECUT2O95948 504 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 ATXN8OSP0DMR3 200 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 IL10P22301 178 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 NUDT2P50583 147 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 LRRC74AQ0VAA2 488 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 SPRED3Q2MJR0 410 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 PAGE3Q5JUK9 113 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 ZNF595Q8IYB9 648 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 MKKSQ9NPJ1 570 aaPredicted RBP27.09■■□□□ 1.93
BRF1-213ENST00000548421 GIMAP4Q9NUV9 329 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 DLL3Q9NYJ7 618 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 ENTPD4Q9Y227 616 aa27.09■■□□□ 1.93
BRF1-213ENST00000548421 MEN1O00255 615 aa27.08■■□□□ 1.93
BRF1-213ENST00000548421 ERAL1O75616 437 aaKnown RBP27.08■■□□□ 1.93
BRF1-213ENST00000548421 LACTB2Q53H82 288 aaPredicted RBP27.08■■□□□ 1.93
BRF1-213ENST00000548421 TMEM164Q5U3C3 297 aa27.08■■□□□ 1.93
BRF1-213ENST00000548421 FAM180BQ6P0A1 224 aa27.08■■□□□ 1.93
BRF1-213ENST00000548421 MED25Q71SY5 747 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms