RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	IDO1	P14902	403 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	LIF	P15018	202 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	ACPP	P15309	386 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	F8A1	P23610	371 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	PPP2R1B	P30154	601 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	OTX2	P32243	289 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	BTG2	P78543	158 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	ID2	Q02363	134 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	NSDHL	Q15738	373 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	OR52E8	Q6IFG1	317 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	OGFOD2	Q6N063	350 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	CGB2	Q6NT52	195 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	LRRC69	Q6ZNQ3	347 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	IKBIP	Q70UQ0	350 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	LAPTM4B	Q86VI4	370 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	OR4N5	Q8IXE1	308 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	FAM9C	Q8IZT9	166 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	MMP21	Q8N119	569 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	OR2Y1	Q8NGV0	311 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	SNIP1	Q8TAD8	396 aa	Known RBP	9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	UCN3	Q969E3	161 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	C11orf24	Q96F05	449 aa	Predicted RBP	9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	EGLN2	Q96KS0	407 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	FCRL1	Q96LA6	429 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	CATSPER2	Q96P56	530 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	ZBTB18	Q99592	522 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	PRPF18	Q99633	342 aa	Known RBP	9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	DPH1	Q9BZG8	443 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	DPY30	Q9C005	99 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	VN1R1	Q9GZP7	353 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	EPN3	Q9H201	632 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	ACTL8	Q9H568	366 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	KCNK13	Q9HB14	408 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	MYNN	Q9NPC7	610 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	PRDM9	Q9NQV7	894 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	LANCL2	Q9NS86	450 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	GIMAP4	Q9NUV9	329 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	SH3BP4	Q9P0V3	963 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	C5AR2	Q9P296	337 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	DKK4	Q9UBT3	224 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	UTS2R	Q9UKP6	389 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	TCFL5	Q9UL49	500 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	MMACHC	Q9Y4U1	282 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	MRPS18B	Q9Y676	258 aa	Known RBP	9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545	AHCTF1	Q8WYP5	2266 aa		9.56	□□□□□ -0.88
CPSF7-221	ENST00000543545		A8MUA0	341 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	LDB3	O75112	727 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	ALOX12B	O75342	701 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	CREG1	O75629	220 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	KLF7	O75840	302 aa	Predicted RBP	9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	IGHE	P01854	428 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	ALDOC	P09972	364 aa	Known RBP	9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	C8orf89	P0DMQ9	161 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	COX7A2	P14406	83 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	DDX5	P17844	614 aa	Known RBP	9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	TNNI3	P19429	210 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	DDC	P20711	480 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	PRPS1L1	P21108	318 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	MAOA	P21397	527 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	PIK3R1	P27986	724 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	HPCAL1	P37235	193 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	RPL3	P39023	403 aa	Known RBP	9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	XK	P51811	444 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	HNRNPF	P52597	415 aa	Known RBP	9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	HSD17B7	P56937	341 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	SSPN	Q14714	243 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	PTGR1	Q14914	329 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	GSTA3	Q16772	222 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	PGS1	Q32NB8	556 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	FAM71E1	Q6IPT2	247 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	ANKRD26P1	Q6NSI1	321 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	R3HCC1L	Q7Z5L2	792 aa	Known RBP	9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	RAB43	Q86YS6	212 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	TICAM1	Q8IUC6	712 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	MIER2	Q8N344	545 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	KRTCAP2	Q8N6L1	136 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	TMEM52	Q8NDY8	209 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	OR4K14	Q8NGD5	310 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	ZCCHC14	Q8WYQ9	949 aa	Known RBP	9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	STARD8	Q92502	1023 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	TSLP	Q969D9	159 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	EXOSC8	Q96B26	276 aa	Known RBP	9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	PPCDC	Q96CD2	204 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	KLHL29	Q96CT2	875 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	BBS4	Q96RK4	519 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	CCNL2	Q96S94	520 aa	Predicted RBP	9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	CCT8L2	Q96SF2	557 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	SPSB2	Q99619	263 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	ALOXE3	Q9BYJ1	711 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	FAM117A	Q9C073	453 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	REEP4	Q9H6H4	257 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	NECTIN3	Q9NQS3	549 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	PNO1	Q9NRX1	252 aa	Known RBP	9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	SEMA3G	Q9NS98	782 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	AIG1	Q9NVV5	245 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	ASIC5	Q9NY37	505 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	HEY2	Q9UBP5	337 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	ENTPD4	Q9Y227	616 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	RAX	Q9Y2V3	346 aa		9.55	□□□□□ -0.88
CPSF7-221	ENST00000543545	ZNF780B	Q9Y6R6	833 aa		9.55	□□□□□ -0.88

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms