RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 ZNF793Q6ZN11 406 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 C16orf47Q6ZP98 133 aaPredicted RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 TAOK1Q7L7X3 1001 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 GOLGA7Q7Z5G4 137 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 MRGPRGQ86SM5 289 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 GPR180Q86V85 440 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 TICAM1Q8IUC6 712 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 SPPL2CQ8IUH8 684 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 RELL1Q8IUW5 271 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 OR4N5Q8IXE1 308 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 PLD6Q8N2A8 252 aaKnown RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 NOA1Q8NC60 698 aaKnown RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 MORN4Q8NDC4 146 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 C7orf57Q8NEG2 295 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 OR14A16Q8NHC5 309 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 UBTD2Q8WUN7 234 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 ASB15Q8WXK1 588 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 PHF21BQ96EK2 531 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 GPR137Q96N19 417 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 FRMD6Q96NE9 622 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 DGAT2Q96PD7 388 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 SORBS1Q9BX66 1292 aaKnown RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 ACSS3Q9H6R3 686 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 TRIM45Q9H8W5 580 aaPredicted RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 TIMMDC1Q9NPL8 285 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 ZNF358Q9NW07 568 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 HPF1Q9NWY4 346 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 MS4A12Q9NXJ0 267 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 KLF13Q9Y2Y9 288 aaPredicted RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 CLDN16Q9Y5I7 305 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 PHF3Q92576 2039 aaKnown RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 CREBBPQ92793 2442 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 NCKAP5O14513 1909 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 PKDREJQ9NTG1 2253 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 ZNF407Q9C0G0 2248 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 A0A087WUV0 522 aaPredicted RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 ARHGAP10A1A4S6 786 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 HAX1O00165 279 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 TFECO14948 347 aaPredicted RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 ZNHIT1O43257 154 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 DYRK3O43781 588 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 PEX1O43933 1283 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 KLK8O60259 260 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 PRKNO60260 465 aaPredicted RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 CDC40O60508 579 aaKnown RBP eCLIP8.38□□□□□ -1.07
LMO3-222ENST00000540445 UGDHO60701 494 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 SMIM24O75264 130 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 KRT38O76015 456 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 PDE9AO76083 593 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 CLDN9O95484 217 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 ALDOAP04075 364 aaKnown RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 TUBB4AP04350 444 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 RFC3P40938 356 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 BUD31P41223 144 aaPredicted RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 PIK3CGP48736 1102 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 MEOX1P50221 254 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 SERPINB9P50453 376 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 GPR143P51810 404 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 NEK2P51955 445 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 CCNG1P51959 295 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 GPR85P60893 370 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 PCDH1Q08174 1060 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 BIKQ13323 160 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 E2F2Q14209 437 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 NAA30Q147X3 362 aaPredicted RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 C3AR1Q16581 482 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 TEX35Q5T0J7 233 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 UBAP2Q5T6F2 1119 aaKnown RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 LGSNQ5TDP6 509 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 C18orf63Q68DL7 685 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 CYP20A1Q6UW02 462 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 MDGA2Q7Z553 956 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 ZNF227Q86WZ6 799 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 SLC34A3Q8N130 599 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 ARMC10Q8N2F6 343 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 GHDCQ8N2G8 530 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 POGLUT1Q8NBL1 392 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 OR5L2Q8NGL0 311 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 KIF18AQ8NI77 898 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 SLC2A12Q8TD20 617 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 PTPMT1Q8WUK0 201 aaPredicted RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 SLC44A1Q8WWI5 657 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 TANKQ92844 425 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 ANKRD9Q96BM1 317 aaPredicted RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 PPWD1Q96BP3 646 aaKnown RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 CCDC120Q96HB5 630 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 GPR78Q96P69 363 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 CDK15Q96Q40 435 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 PAFAH2Q99487 392 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 RPF2Q9H7B2 306 aaKnown RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 NOL11Q9H8H0 719 aaKnown RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 DMRT3Q9NQL9 472 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 MYOTQ9UBF9 498 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 COPS7AQ9UBW8 275 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 PHF11Q9UIL8 331 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 TINAGQ9UJW2 476 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 ZNF223Q9UK11 482 aaPredicted RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 TMCO1Q9UM00 188 aa8.38□□□□□ -1.07
LMO3-222ENST00000540445 PPIEQ9UNP9 301 aaKnown RBP8.38□□□□□ -1.07
LMO3-222ENST00000540445 RNF11Q9Y3C5 154 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms