RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 FBF1Q8TES7 1133 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 ZNF473Q8WTR7 871 aaKnown RBP16.54■□□□□ 0.24
PCF11-206ENST00000533018 LURAP1Q96LR2 239 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 RASL10BQ96S79 203 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 DMRTA2Q96SC8 542 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 MS4A8Q9BY19 250 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 TRIM8Q9BZR9 551 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 RAB17Q9H0T7 212 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 DEPPQ9NTK1 212 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 COPS7AQ9UBW8 275 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 ANGPTL3Q9Y5C1 460 aa16.54■□□□□ 0.24
PCF11-206ENST00000533018 K7EPI3 171 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 LTA4HP09960 611 aaKnown RBP16.53■□□□□ 0.24
PCF11-206ENST00000533018 SLC35E2BP0CK96 405 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 COX7A2P14406 83 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 HIST1H1TP22492 207 aaPredicted RBP16.53■□□□□ 0.24
PCF11-206ENST00000533018 CRABP2P29373 138 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 STX2P32856 288 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 CASP2P42575 452 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 MAGEA4P43358 317 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 RAP1GDS1P52306 607 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 HK2P52789 917 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 RNF4P78317 190 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 DLG1Q12959 904 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 ZNF750Q32MQ0 723 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 TMEM211Q6ICI0 200 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 OR4N5Q8IXE1 308 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 OR2M7Q8NG81 312 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 OR5L2Q8NGL0 311 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 FBXO25Q8TCJ0 367 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 SLC2A12Q8TD20 617 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 MRRFQ96E11 262 aaKnown RBP16.53■□□□□ 0.24
PCF11-206ENST00000533018 CMTM7Q96FZ5 175 aa16.53■□□□□ 0.24
PCF11-206ENST00000533018 CCDC168Q8NDH2 2452 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 PINLYPA6NC86 204 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 KERAO60938 352 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 EPB42P16452 691 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 SLAMF1Q13291 335 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 KHDRBS2Q5VWX1 349 aaKnown RBP16.52■□□□□ 0.24
PCF11-206ENST00000533018 OR4C11Q6IEV9 310 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 RTL4Q6ZR62 310 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 ZNF295-AS1Q8N0V1 137 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 TEX9Q8N6V9 391 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 OR7G3Q8NG95 312 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 CHTF18Q8WVB6 975 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 NXNL1Q96CM4 212 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 DGAT2Q96PD7 388 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 CENPKQ9BS16 269 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 SORBS1Q9BX66 1292 aaKnown RBP16.52■□□□□ 0.24
PCF11-206ENST00000533018 OR51B5Q9H339 312 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 TP63Q9H3D4 680 aaPredicted RBP16.52■□□□□ 0.24
PCF11-206ENST00000533018 ITGB1BP2Q9UKP3 347 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 ACOT9Q9Y305 439 aa16.52■□□□□ 0.24
PCF11-206ENST00000533018 A0A0G2JMM0 328 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 A0A1W2PPB8 328 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 A0A1W2PRS3 328 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 SYCE1LA8MT33 242 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 KIR3DP1A8MWS1 328 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 NPIPA2E9PIF3 369 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 NPIPA3F8WFD2 350 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 DYRK3O43781 588 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 C1QAP02745 245 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 SERPINB1P30740 379 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 SSTR2P30874 369 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 NR0B1P51843 470 aaKnown RBP16.51■□□□□ 0.23
PCF11-206ENST00000533018 MROH9Q5TGP6 573 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 OPN5Q6U736 354 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 MEX3BQ6ZN04 569 aaKnown RBP16.51■□□□□ 0.23
PCF11-206ENST00000533018 GK5Q6ZS86 529 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 FAM47EQ6ZV65 393 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 SLC22A16Q86VW1 577 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 LAS2Q8IYD9 372 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 RNF175Q8N4F7 328 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 OR8K3Q8NH51 312 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 RND1Q92730 232 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 RGMAQ96B86 450 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 ANKRD9Q96BM1 317 aaPredicted RBP16.51■□□□□ 0.23
PCF11-206ENST00000533018 PPWD1Q96BP3 646 aaKnown RBP16.51■□□□□ 0.23
PCF11-206ENST00000533018 SCYL1Q96KG9 808 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 ATOH8Q96SQ7 321 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 FAM173AQ9BQD7 235 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 TTTY12Q9BZ98 90 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 IGSF5Q9NSI5 407 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 HRH3Q9Y5N1 445 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 INTS1Q8N201 2190 aaKnown RBP16.51■□□□□ 0.23
PCF11-206ENST00000533018 CELSR1Q9NYQ6 3014 aa16.51■□□□□ 0.23
PCF11-206ENST00000533018 FGF17O60258 216 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 ETHE1O95571 254 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 P04436 131 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 GFAPP14136 432 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 CNR1P21554 472 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 TLX1P31314 330 aaPredicted RBP16.5■□□□□ 0.23
PCF11-206ENST00000533018 NAB1Q13506 487 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 TRADDQ15628 312 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 UAP1Q16222 522 aaPredicted RBP16.5■□□□□ 0.23
PCF11-206ENST00000533018 FAM83EQ2M2I3 478 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 DEPDC1Q5TB30 811 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 GRHL2Q6ISB3 625 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 RGS9BPQ6ZS82 235 aa16.5■□□□□ 0.23
PCF11-206ENST00000533018 MARVELD2Q8N4S9 558 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms