RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 HNF4AP41235 474 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 RPL21P46778 160 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 STXBP1P61764 594 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 CRADDP78560 199 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 SP140Q13342 867 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 SERTAD2Q14140 314 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 RCAN2Q14206 197 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 RCN2Q14257 317 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 EFTUD2Q15029 972 aaKnown RBP eCLIP10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 ETFDHQ16134 617 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 WIPI1Q5MNZ9 446 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 TBCELQ5QJ74 424 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 NEPROQ6NW34 567 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 SCIMPQ6UWF3 145 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 PIWIL4Q7Z3Z4 852 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 MILR1Q7Z6M3 343 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 ANKRD53Q8N9V6 530 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 C9orf106Q8NAJ2 232 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 OR56A3Q8NH54 315 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 SLC2A12Q8TD20 617 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 TMEM171Q8WVE6 324 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 ALKBH8Q96BT7 664 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 SPACA9Q96E40 222 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 PIK3IP1Q96FE7 263 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 HIST1H2AHQ96KK5 128 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 WFIKKN1Q96NZ8 548 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 HIST1H2AJQ99878 128 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 H2AFJQ9BTM1 129 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 ALOXE3Q9BYJ1 711 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 FRMD8P1Q9BZ68 369 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 OR8D2Q9GZM6 311 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 CCDC68Q9H2F9 335 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 EIF2B3Q9NR50 452 aaKnown RBP10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 FETUBQ9UGM5 382 aa10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 CHCHD2Q9Y6H1 151 aaPredicted RBP10.64□□□□□ -0.71
AMBRA1-207ENST00000529553 A0A088AWK7 358 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 C17orf105B2RV13 164 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 GOLGA8KD6RF30 607 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 GOLGA8TH3BQL2 631 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 CYR61O00622 381 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 SNX4O95219 450 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 CPN1P15169 458 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 PAMP19021 973 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 ZNF10P21506 573 aaPredicted RBP10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 CDK9P50750 372 aaKnown RBP10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 HNRNPFP52597 415 aaKnown RBP10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 ASPHQ12797 758 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 STX4Q12846 297 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 FOXF2Q12947 444 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 CTBP1Q13363 440 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 OASLQ15646 514 aaKnown RBP10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 PRAMEF20Q5VT98 475 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 ZNF549Q6P9A3 640 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 LYPD8Q6UX82 237 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 LUZP1Q86V48 1076 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 CAND1Q86VP6 1230 aaKnown RBP10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 ZNF321PQ8N8H1 164 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 TMEM52Q8NDY8 209 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 CD200R1Q8TD46 325 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 SLC5A11Q8WWX8 675 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 WNT2BQ93097 391 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 UCN3Q969E3 161 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 ABTB1Q969K4 478 aaPredicted RBP10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 GAL3ST3Q96A11 431 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 MARK4Q96L34 752 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 JSRP1Q96MG2 331 aaPredicted RBP10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 OR4K3Q96R72 315 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 DOHHQ9BU89 302 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 UGT2B28Q9BY64 529 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 REG4Q9BYZ8 158 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 AMBRA1Q9C0C7 1298 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 UBQLN3Q9H347 655 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 PELI2Q9HAT8 420 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 YAE1D1Q9NRH1 226 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 PAK5Q9P286 719 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 COPS7AQ9UBW8 275 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 CDC42EP3Q9UKI2 254 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 ADAMTS6Q9UKP5 1117 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 CNOT11Q9UKZ1 510 aaKnown RBP10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 SOX13Q9UN79 622 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 PCDHA13Q9Y5I0 950 aa10.63□□□□□ -0.71
AMBRA1-207ENST00000529553 A0A087X1B8 175 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 A8MV72 311 aaPredicted RBP10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 RNF223E7ERA6 249 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 GOLGA6L19H0YKK7 550 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 GOLGA6L22H0YM25 854 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 MSTNO14793 375 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 B3GALT2O43825 422 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 NRDCO43847 1150 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 MFAP3LO75121 409 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 TRAPPC6AO75865 159 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 ACSL3O95573 720 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 ACTL6AO96019 429 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 IFNB1P01574 187 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 FBXO45P0C2W1 286 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 CYP4B1P13584 511 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 NID1P14543 1247 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 ANP32AP39687 249 aaKnown RBP10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 ATP5J2P56134 94 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 REEP5Q00765 189 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms