RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ISL2Q96A47 359 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 FRMD6Q96NE9 622 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 NOL11Q9H8H0 719 aaKnown RBP17.28■□□□□ 0.36
CAPN1-203ENST00000525013 TRIM45Q9H8W5 580 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-203ENST00000525013 LIN28AQ9H9Z2 209 aaKnown RBP17.28■□□□□ 0.36
CAPN1-203ENST00000525013 XPR1Q9UBH6 696 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 TMCO1Q9UM00 188 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 NPIPA1Q9UND3 350 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 EML6Q6ZMW3 1958 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 CELSR2Q9HCU4 2923 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 EXOC1LA0A1B0GW35 172 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 H0YIV9 168 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 PLPP1O14494 284 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 PRKNO60260 465 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-203ENST00000525013 CLDN9O95484 217 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 TLX1P31314 330 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-203ENST00000525013 SSR4P51571 173 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 NEK2P51955 445 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 CCNG1P51959 295 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 CASP6P55212 293 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 ZRSR2Q15696 482 aaKnown RBP17.27■□□□□ 0.36
CAPN1-203ENST00000525013 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.27■□□□□ 0.36
CAPN1-203ENST00000525013 KRTCAP3Q53RY4 240 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 METTL2BQ6P1Q9 378 aaKnown RBP17.27■□□□□ 0.36
CAPN1-203ENST00000525013 HSDL2Q6YN16 418 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 C16orf47Q6ZP98 133 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-203ENST00000525013 GPR180Q86V85 440 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 OR4N5Q8IXE1 308 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 CPSF7Q8N684 471 aaKnown RBP17.27■□□□□ 0.36
CAPN1-203ENST00000525013 MORN4Q8NDC4 146 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 ANKRD9Q96BM1 317 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-203ENST00000525013 MTFMTQ96DP5 389 aaKnown RBP17.27■□□□□ 0.36
CAPN1-203ENST00000525013 MAGED4Q96JG8 741 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 GPR137Q96N19 417 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 CDK15Q96Q40 435 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 MS4A12Q9NXJ0 267 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 PHF11Q9UIL8 331 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 ZNF180Q9UJW8 692 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 ERVK-11Q9UQG0 969 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 KLF13Q9Y2Y9 288 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-203ENST00000525013 YARS2Q9Y2Z4 477 aaKnown RBP17.27■□□□□ 0.36
CAPN1-203ENST00000525013 TSC22D4Q9Y3Q8 395 aa17.27■□□□□ 0.36
CAPN1-203ENST00000525013 CCL21O00585 134 aa17.26■□□□□ 0.35
CAPN1-203ENST00000525013 SLC19A2O60779 497 aa17.26■□□□□ 0.35
CAPN1-203ENST00000525013 OR2J2O76002 312 aa17.26■□□□□ 0.35
CAPN1-203ENST00000525013 SNRPAP09012 282 aaKnown RBP17.26■□□□□ 0.35
CAPN1-203ENST00000525013 COL6A2P12110 1019 aa17.26■□□□□ 0.35
CAPN1-203ENST00000525013 ZNF24P17028 368 aa17.26■□□□□ 0.35
CAPN1-203ENST00000525013 LGSNQ5TDP6 509 aa17.26■□□□□ 0.35
CAPN1-203ENST00000525013 CYP20A1Q6UW02 462 aa17.26■□□□□ 0.35
CAPN1-203ENST00000525013 L3MBTL4Q8NA19 623 aa17.26■□□□□ 0.35
CAPN1-203ENST00000525013 OR52B6Q8NGF0 335 aa17.26■□□□□ 0.35
CAPN1-203ENST00000525013 TRIM44Q96DX7 344 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-203ENST00000525013 RPF2Q9H7B2 306 aaKnown RBP17.26■□□□□ 0.35
CAPN1-203ENST00000525013 SUCOQ9UBS9 1254 aaKnown RBP17.26■□□□□ 0.35
CAPN1-203ENST00000525013 KLRC4-KLRK1H3BQV0 150 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 STX16-NPEPL1H3BU86 382 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 WWP2O00308 870 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 OR7A17O14581 309 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 STX16O14662 325 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 FGF17O60258 216 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 EEDO75530 441 aaKnown RBP17.25■□□□□ 0.35
CAPN1-203ENST00000525013 RHOXF2BP0C7M4 288 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 COX7A2P14406 83 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 CA7P43166 264 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 MEOX1P50221 254 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 HNRNPH2P55795 449 aaKnown RBP17.25■□□□□ 0.35
CAPN1-203ENST00000525013 TNFRSF17Q02223 184 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 RNFT1Q5M7Z0 435 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 C18orf63Q68DL7 685 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 TTC19Q6DKK2 380 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-203ENST00000525013 ZCCHC7Q8N3Z6 543 aaKnown RBP17.25■□□□□ 0.35
CAPN1-203ENST00000525013 ZNF321PQ8N8H1 164 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 SLC2A12Q8TD20 617 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 ASB15Q8WXK1 588 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 TANKQ92844 425 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 RBM18Q96H35 190 aaKnown RBP17.25■□□□□ 0.35
CAPN1-203ENST00000525013 NSUN5Q96P11 429 aaKnown RBP17.25■□□□□ 0.35
CAPN1-203ENST00000525013 DGAT2Q96PD7 388 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 MRPL57Q9BQC6 102 aaKnown RBP17.25■□□□□ 0.35
CAPN1-203ENST00000525013 RHOXF2Q9BQY4 288 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 TIMMDC1Q9NPL8 285 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 MYOTQ9UBF9 498 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 COPS7AQ9UBW8 275 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 PCTPQ9UKL6 214 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 ATG4BQ9Y4P1 393 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 DNAJC13O75165 2243 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 ZNF407Q9C0G0 2248 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 NBPF19A0A087WUL8 3843 aa17.25■□□□□ 0.35
CAPN1-203ENST00000525013 TMEM200CA6NKL6 621 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 A8MVJ9 347 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 ASNA1O43681 348 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 PRKRAO75569 313 aaKnown RBP17.24■□□□□ 0.35
CAPN1-203ENST00000525013 ETHE1O95571 254 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 RFC3P40938 356 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 BUD31P41223 144 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-203ENST00000525013 ARFIP1P53367 373 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 CUL3Q13618 768 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 TEX35Q5T0J7 233 aa17.24■□□□□ 0.35
CAPN1-203ENST00000525013 ZNF787Q6DD87 383 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms