RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PRXQ9BXM0 1461 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 PCF11O94913 1555 aaKnown RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 TIAM1Q13009 1591 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 CUL7Q14999 1698 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 GCC2Q8IWJ2 1684 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 A0A087WW49 117 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 A0A1B0GWJ7 208 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 RNF222A6NCQ9 220 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 A8MU76 341 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 OGTO15294 1046 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 GAS8O95995 478 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 IFNB1P01574 187 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 SFTPBP07988 381 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 CCDC192P0DO97 292 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZNF18P17022 549 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 SLC1A3P43003 542 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 NAAAQ02083 359 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 GUCY2DQ02846 1103 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 SGCGQ13326 291 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 DRP2Q13474 957 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 KLHL22Q53GT1 634 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 ADAMTSL4-AS1Q5T5F5 129 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 LYPLAL1Q5VWZ2 237 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 LIPJQ5W064 366 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 CES4AQ5XG92 561 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 SH2D5Q6ZV89 423 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 SLC26A9Q7LBE3 791 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZNF444Q8N0Y2 327 aaPredicted RBP2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 LSMEM2Q8N112 164 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 CNPY4Q8N129 248 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 IPMKQ8NFU5 416 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 SMAP2Q8WU79 429 aaPredicted RBP2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 SUSD6Q92537 303 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 SLCO2A1Q92959 643 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 CCDC51Q96ER9 411 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZNF486Q96H40 463 aaPredicted RBP2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 PCED1BQ96HM7 432 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 RAB40CQ96S21 281 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 NODALQ96S42 347 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 TESK2Q96S53 571 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 IL12RB2Q99665 862 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 FUCA2Q9BTY2 467 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 NMNAT2Q9BZQ4 307 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 FAM49AQ9H0Q0 323 aaPredicted RBP2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 COQ10BQ9H8M1 238 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 PLEK2Q9NYT0 353 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 SH3BGRL2Q9UJC5 107 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 TMCC3Q9ULS5 477 aa2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 MRPS18CQ9Y3D5 142 aaKnown RBP2.94□□□□□ -1.94
HMGN1P28-201ENST00000521340 CLIP1P30622 1438 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 PBRM1Q86U86 1689 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 PARD3Q8TEW0 1356 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 A0A0U1RQV5 110 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 hCG_38984A0A1B0GV85 526 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 CCSO14618 274 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZNF195O14628 629 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 CHEK1O14757 476 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 ARPC1BO15143 372 aaKnown RBP2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 NXPH4O95158 308 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 OR6A2O95222 327 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 SYNGR4O95473 234 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 CYP11B1P15538 503 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 C4BPBP20851 252 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 CTNNA2P26232 953 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 MAP2K2P36507 400 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 MTIF2P46199 727 aaKnown RBP2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 LBX1P52954 281 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 ARFIP1P53367 373 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 GMFBP60983 142 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 SSTP61278 116 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 RPL36AP83881 106 aaKnown RBP2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 KRT31Q15323 416 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZNF699Q32M78 642 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 LRIT3Q3SXY7 679 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 GTDC1Q4AE62 458 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 MPPE1Q53F39 396 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 AGKQ53H12 422 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 FASTKD1Q53R41 847 aaKnown RBP2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 FFAR4Q5NUL3 377 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 STPG1Q5TH74 334 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 RAET1GQ6H3X3 334 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 NEPROQ6NW34 567 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 OLFM4Q6UX06 510 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 BNIPLQ7Z465 357 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 ADCK1Q86TW2 530 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 BCORP1Q8N888 145 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 OR6M1Q8NGM8 313 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 TMEM45BQ96B21 275 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 CXorf58Q96LI9 332 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 ACCSQ96QU6 501 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 F2RL3Q96RI0 385 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 LITAFQ99732 161 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 WWP1Q9H0M0 922 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 MTIF3Q9H2K0 278 aaKnown RBP2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 MARCH7Q9H992 704 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 PPANQ9NQ55 473 aaKnown RBP2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 SLC35D1Q9NTN3 355 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 ATXN10Q9UBB4 475 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 LHX3Q9UBR4 397 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 DBF4Q9UBU7 674 aaPredicted RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms