RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 WWP2O00308 870 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 CLDN4O14493 209 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 BANF1O75531 89 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 P04436 131 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 ENDOUP21128 410 aaKnown RBP12.85□□□□□ -0.35
SPCS3-204ENST00000513139 TIMP3P35625 211 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 RAB8AP61006 207 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 SARNPP82979 210 aaKnown RBP12.85□□□□□ -0.35
SPCS3-204ENST00000513139 SORDQ00796 357 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 GUCY2DQ02846 1103 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 CTBP1Q13363 440 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 MORF4L2Q15014 288 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 ELAVL1Q15717 326 aaKnown RBP12.85□□□□□ -0.35
SPCS3-204ENST00000513139 PHKG1Q16816 387 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 ZNF750Q32MQ0 723 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 MSS51Q4VC12 460 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 OPN5Q6U736 354 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 MBOAT1Q6ZNC8 495 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 SEM1Q6ZVN7 128 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 ULK2Q8IYT8 1036 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 SIMC1Q8NDZ2 872 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 OR8K3Q8NH51 312 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 OR56A3Q8NH54 315 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 SERPINB12Q96P63 405 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 RHBGQ9H310 441 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 EXO5Q9H790 373 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 LIN28AQ9H9Z2 209 aaKnown RBP12.85□□□□□ -0.35
SPCS3-204ENST00000513139 SPRR3Q9UBC9 169 aa12.85□□□□□ -0.35
SPCS3-204ENST00000513139 CLCA1A8K7I4 914 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 AHRRA9YTQ3 701 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 EPPINO95925 133 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 SERPINA6P08185 405 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 HIST1H2AGP0C0S8 130 aaPredicted RBP12.84□□□□□ -0.35
SPCS3-204ENST00000513139 MLNP12872 115 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 HIST1H2ADP20671 130 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 DNASE1L1P49184 302 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 RGS4P49798 205 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 HK2P52789 917 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 DHX9Q08211 1270 aaKnown RBP12.84□□□□□ -0.35
SPCS3-204ENST00000513139 TBL3Q12788 808 aaKnown RBP12.84□□□□□ -0.35
SPCS3-204ENST00000513139 CSHL1Q14406 222 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 HP1BP3Q5SSJ5 553 aaPredicted RBP12.84□□□□□ -0.35
SPCS3-204ENST00000513139 UGT3A1Q6NUS8 523 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 POMZP3Q6PJE2 187 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 CXorf67Q86X51 503 aaPredicted RBP12.84□□□□□ -0.35
SPCS3-204ENST00000513139 SPNS2Q8IVW8 549 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 DENND6AQ8IWF6 608 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 LMNTD2Q8IXW0 634 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 LRRC75A-AS1Q8N1F1 130 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 NAXEQ8NCW5 288 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 MORN4Q8NDC4 146 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 EEF1AKMT1Q8WVE0 214 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 DAZLQ92904 295 aaKnown RBP12.84□□□□□ -0.35
SPCS3-204ENST00000513139 HIST1H2AHQ96KK5 128 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 OR4K3Q96R72 315 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 HIST1H2AJQ99878 128 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 H2AFJQ9BTM1 129 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 NPLQ9BXD5 320 aaPredicted RBP12.84□□□□□ -0.35
SPCS3-204ENST00000513139 RAB17Q9H0T7 212 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 XAB2Q9HCS7 855 aaKnown RBP12.84□□□□□ -0.35
SPCS3-204ENST00000513139 ACKR4Q9NPB9 350 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 FBXO6Q9NRD1 293 aaPredicted RBP12.84□□□□□ -0.35
SPCS3-204ENST00000513139 PRTFDC1Q9NRG1 225 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 QPCTLQ9NXS2 382 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 TUBA8Q9NY65 449 aaPredicted RBP12.84□□□□□ -0.35
SPCS3-204ENST00000513139 WHRNQ9P202 907 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 ATG4BQ9Y4P1 393 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 CLCA3PQ9Y6N3 262 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.84□□□□□ -0.35
SPCS3-204ENST00000513139 DSCAMO60469 2012 aa12.84□□□□□ -0.35
SPCS3-204ENST00000513139 MAGEB16A2A368 324 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 SDR42E2A6NKP2 422 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 TGFBR3LH3BV60 316 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 RHOXF2BP0C7M4 288 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 CCL3P10147 92 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 PCSK6P29122 969 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 PPP2R1BP30154 601 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 HNF4AP41235 474 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 MAGEA3P43357 314 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 PLTPP55058 493 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 AP1S2P56377 157 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 SLC13A2Q13183 592 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 THOC5Q13769 683 aaKnown RBP12.83□□□□□ -0.36
SPCS3-204ENST00000513139 BMPR2Q13873 1038 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 CATSPEREQ5SY80 951 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 ZDHHC24Q6UX98 284 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 CAPN12Q6ZSI9 719 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 LACC1Q8IV20 430 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 IGDCC3Q8IVU1 814 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 ZNF595Q8IYB9 648 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 ANKRD53Q8N9V6 530 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 TNIP2Q8NFZ5 429 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 NEIL3Q8TAT5 605 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 NEIL2Q969S2 332 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 PYCR2Q96C36 320 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 SIGLEC10Q96LC7 697 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 RHOXF2Q9BQY4 288 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 SPNS1Q9H2V7 528 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 KLHL31Q9H511 634 aa12.83□□□□□ -0.36
SPCS3-204ENST00000513139 TRMT6Q9UJA5 497 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms