RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 TMEM225BP0DP42 221 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 ZNF19P17023 458 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 NPBWR1P48145 328 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 NNATQ16517 81 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 ZNF630Q2M218 657 aaPredicted RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 C9orf135Q5VTT2 229 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 TTC27Q6P3X3 843 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 DCUN1D3Q8IWE4 304 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 PROKR1Q8TCW9 393 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 C15orf40Q8WUR7 153 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 MTERF1Q99551 399 aaKnown RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 SPHK2Q9NRA0 654 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 CCDC59Q9P031 241 aaKnown RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 ZNF69Q9UC07 566 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 ZNF451Q9Y4E5 1061 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 SGCEO43556 437 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 COX6B1P14854 86 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 ACPPP15309 386 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 HTRA3P83110 453 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 VMACQ2NL98 169 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 TIGD2Q4W5G0 525 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 RUNDC3AQ59EK9 446 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 OR52W1Q6IF63 320 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 PIWIL3Q7Z3Z3 882 aaKnown RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 TMED4Q7Z7H5 227 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 TMEFF1Q8IYR6 380 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 PEX11GQ96HA9 241 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 ZNF670Q9BS34 389 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 CPNE5Q9HCH3 593 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 CLEC4EQ9ULY5 219 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 SRPK3Q9UPE1 567 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 LOC102725191A0A1B0GVB3 256 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 C9IYK1 514 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 LCMT2O60294 686 aaKnown RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 PECAM1P16284 738 aaPredicted RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 GJA5P36382 358 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 PTGER3P43115 390 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 PITPNBP48739 271 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 DSTNP60981 165 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 HTD2P86397 168 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 ST3GAL3Q11203 375 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 SLC39A5Q6ZMH5 540 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 TMEM173Q86WV6 379 aaPredicted RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 KIF18BQ86Y91 864 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 FAM47BQ8NA70 645 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 COL21A1Q96P44 957 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 DUSP26Q9BV47 211 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 CDC42EP4Q9H3Q1 356 aaKnown RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 DHDHQ9UQ10 334 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 PRAMEF33A0A0G2JMD5 474 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 FAM237AA0A1B0GTK4 181 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 MYOCOSA0A1B0GUC4 107 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 CLCA1A8K7I4 914 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 PRAMEF10O60809 474 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 SEC14L2O76054 403 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 OAS1P00973 400 aaKnown RBP8.58□□□□□ -1.04
VCAN-208ENST00000512590 IFNA7P01567 189 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 FCER2P06734 321 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 PET100P0DJ07 73 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 PRPS2P11908 318 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 PRKAR1BP31321 381 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 UQCRFS1P47985 274 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 NRF1Q16656 503 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 DUOXA1Q1HG43 343 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 CRTC2Q53ET0 693 aaPredicted RBP8.58□□□□□ -1.04
VCAN-208ENST00000512590 FRMPD2BQ6IN97 320 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 KDM1BQ8NB78 822 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 OR51D1Q8NGF3 324 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 HM13Q8TCT9 377 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 OXNAD1Q96HP4 312 aaPredicted RBP8.58□□□□□ -1.04
VCAN-208ENST00000512590 SECISBP2Q96T21 854 aaKnown RBP8.58□□□□□ -1.04
VCAN-208ENST00000512590 ZNF649Q9BS31 505 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 SCML1Q9UN30 329 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 ABCD4O14678 606 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 MRPL33O75394 65 aaKnown RBP8.58□□□□□ -1.04
VCAN-208ENST00000512590 GOT2P00505 430 aaKnown RBP8.58□□□□□ -1.04
VCAN-208ENST00000512590 IGFBP5P24593 272 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 ETV5P41161 510 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 RAC1P63000 192 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 DDR1Q08345 913 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 PIGGQ5H8A4 983 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 FBXW8Q8N3Y1 598 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 CERS5Q8N5B7 392 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 CHPT1Q8WUD6 406 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 ZNF75CPQ92670 426 aaPredicted RBP8.58□□□□□ -1.04
VCAN-208ENST00000512590 NMUR2Q9GZQ4 415 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 PAK1IP1Q9NWT1 392 aaPredicted RBP8.58□□□□□ -1.04
VCAN-208ENST00000512590 SLC7A7Q9UM01 511 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 DISP2A7MBM2 1401 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 C1orf167Q5SNV9 1468 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 PRAMEF26H0Y7S4 382 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 KLK10O43240 276 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 CD6P30203 668 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 SSTR1P30872 391 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 BMPR1AP36894 532 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 VASPP50552 380 aaPredicted RBP8.58□□□□□ -1.04
VCAN-208ENST00000512590 BMXP51813 675 aa8.58□□□□□ -1.04
VCAN-208ENST00000512590 GANABQ14697 944 aaKnown RBP8.58□□□□□ -1.04
VCAN-208ENST00000512590 LIPMQ5VYY2 423 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms