RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 LRRC46Q96FV0 321 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 YIPF4Q9BSR8 244 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 DESI2Q9BSY9 194 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 NPLQ9BXD5 320 aaPredicted RBP17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 ALOXE3Q9BYJ1 711 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 C20orf96Q9NUD7 363 aaPredicted RBP17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 VTI1BQ9UEU0 232 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 TRPS1Q9UHF7 1281 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 MED12LQ86YW9 2145 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 DSCAMO60469 2012 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 HEATR5AQ86XA9 2040 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 EEF1E1-BLOC1S5C9J1V9 151 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 ARHGEF9O43307 516 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 EEF1E1O43324 174 aaKnown RBP17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 ERI3O43414 337 aaKnown RBP17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 IPO7O95373 1038 aaKnown RBP17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 HIST1H2AGP0C0S8 130 aaPredicted RBP17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 HIST1H2ADP20671 130 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 CERS1P27544 350 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 MAGEA6P43360 314 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 VPS41P49754 854 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 LIM2P55344 173 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 ID2Q02363 134 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 DUSP8Q13202 625 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 HSP90AA5PQ58FG0 334 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 ADNP2Q6IQ32 1131 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 C4orf22Q6V702 233 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 THOC6Q86W42 341 aaKnown RBP17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 KIF18BQ86Y91 864 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 LACC1Q8IV20 430 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 KLHDC8AQ8IYD2 350 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 DAZLQ92904 295 aaKnown RBP17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 HIST1H2AHQ96KK5 128 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 TIMP4Q99727 224 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 HIST1H2AJQ99878 128 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 AIF1LQ9BQI0 150 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 H2AFJQ9BTM1 129 aa17.46■□□□□ 0.39
HMGCS1-206ENST00000511774 C15orf38-AP3S2A0A0A6YYH1 394 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 LRIT2A6NDA9 550 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 AHRRA9YTQ3 701 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 C17orf105B2RV13 164 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 SIAH2O43255 324 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 CTNSO60931 367 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 LDB3O75112 727 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 AP1S2P56377 157 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 KCNJ2P63252 427 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 MPEG1Q2M385 716 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 DCST1Q5T197 706 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 SLC22A10Q63ZE4 541 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 GSTA5Q7RTV2 222 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 VN1R5Q7Z5H4 357 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 P3H2Q8IVL5 708 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 C9orf40Q8IXQ3 194 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 SIMC1Q8NDZ2 872 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 OR14A16Q8NHC5 309 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 HOMER3Q9NSC5 361 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 IARS2Q9NSE4 1012 aaKnown RBP17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 SLC22A14Q9Y267 594 aa17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 CHCHD2Q9Y6H1 151 aaPredicted RBP17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 RAI1Q7Z5J4 1906 aaPredicted RBP17.45■□□□□ 0.38
HMGCS1-206ENST00000511774 USF3Q68DE3 2245 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 GOLGA8MH3BSY2 632 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 HRKO00198 91 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 IL2RAP01589 272 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 SOX18P35713 384 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 PLA2G16P53816 162 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 STXBP1P61764 594 aaKnown RBP17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 BBS9Q3SYG4 887 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 ARMC3Q5W041 872 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 NSUN5P2Q63ZY6 315 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 SBSNQ6UWP8 590 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 DGAT2L6Q6ZPD8 337 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 TMEM139Q8IV31 216 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 LRRC75A-AS1Q8N1F1 130 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 C2CD4AQ8NCU7 369 aaPredicted RBP17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 OR10G3Q8NGC4 313 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 FAR2Q96K12 515 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 TRIM5Q9C035 493 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 PRDM14Q9GZV8 571 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 TAS2R13Q9NYV9 303 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 SLC17A6Q9P2U8 582 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 CNOT11Q9UKZ1 510 aaKnown RBP17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 BOKQ9UMX3 212 aaPredicted RBP17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 DAPP1Q9UN19 280 aa17.44■□□□□ 0.38
HMGCS1-206ENST00000511774 SDR42E2A6NKP2 422 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 B3GALT2O43825 422 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 GOSR1O95249 250 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 CTSSP25774 331 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 KIF5AQ12840 1032 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 FOXF2Q12947 444 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 PPP1R3AQ16821 1122 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 C18orf21Q32NC0 220 aaPredicted RBP17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 YTHDF3Q7Z739 585 aaKnown RBP17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 RASGEF1CQ8N431 466 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 LIX1Q8N485 282 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 C9orf106Q8NAJ2 232 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 OR5L2Q8NGL0 311 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 DOK4Q8TEW6 326 aa17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 SPACA9Q96E40 222 aaPredicted RBP17.43■□□□□ 0.38
HMGCS1-206ENST00000511774 SIGLEC10Q96LC7 697 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms